RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 VWA3BQ502W6 1294 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TRIM68Q6AZZ1 485 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PLBD1Q6P4A8 553 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SLC39A5Q6ZMH5 540 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 OTOP3Q7RTS5 596 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TPH2Q8IWU9 490 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TRIM22Q8IYM9 498 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ARRDC4Q8NCT1 418 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 TRPV1Q8NER1 839 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 FAM200AQ8TCP9 573 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 PANK1Q8TE04 598 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SH3RF3Q8TEJ3 882 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF75CPQ92670 426 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 RBM18Q96H35 190 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 CDK5RAP3Q96JB5 506 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 C1orf74Q96LT6 269 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ALG1Q9BT22 464 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 SEMA6BQ9H3T3 888 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF304Q9HCX3 659 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 VPS45Q9NRW7 570 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 EIF2B4Q9UI10 523 aaKnown RBP3.02□□□□□ -1.93
PRPF39-206ENST00000554429 DGKBQ9Y6T7 804 aa3.02□□□□□ -1.93
PRPF39-206ENST00000554429 C2orf81A6NN90 581 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SEPT4O43236 478 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 KLHL41O60662 606 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SLC25A27O95847 323 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CYP1A2P05177 515 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CTSHP09668 335 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 BTF3P20290 206 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CCND3P30281 292 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 POLR2BP30876 1174 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 GALNSP34059 522 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 RARSP54136 660 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 JAG1P78504 1218 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 TFCP2Q12800 502 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MTMR2Q13614 643 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MUM1Q2TAK8 710 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SLC45A4Q5BKX6 768 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MZT2AQ6P582 158 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 OLFML1Q6UWY5 402 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MAMDC4Q6UXC1 1216 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MAGEB6Q8N7X4 407 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 KLHDC9Q8NEP7 349 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 USP33Q8TEY7 942 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MTMR8Q96EF0 704 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 EDC3Q96F86 508 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PURBQ96QR8 312 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 HERPUD2Q9BSE4 406 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 KATNAL1Q9BW62 490 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 UNC45AQ9H3U1 944 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CYLDQ9NQC7 956 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PDLIM7Q9NR12 457 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 AASDHPPTQ9NRN7 309 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ATP8A2Q9NTI2 1148 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 EXOC1Q9NV70 894 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 RRN3Q9NYV6 651 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 FLRT1Q9NZU1 646 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 GIMAP2Q9UG22 337 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 GTF2IRD1Q9UHL9 959 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PFDN2Q9UHV9 154 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SUFUQ9UMX1 484 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 COL4A4P53420 1690 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CNTNAP5Q8WYK1 1306 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PTPRSQ13332 1948 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 DTNBO60941 627 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 HLA-DOAP06340 250 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PARP1P09874 1014 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ZSCAN20P17040 1043 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SHMT1P34896 483 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CTNNA1P35221 906 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 NEK2P51955 445 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 RTP1P59025 263 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 DAB2P98082 770 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ATP8B2P98198 1209 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 KCNH2Q12809 1159 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SMAD4Q13485 552 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MTMR1Q13613 665 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 BRICD5Q6PL45 260 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 TMCO3Q6UWJ1 677 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 DNAJB7Q7Z6W7 309 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 HOMER1Q86YM7 354 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SLC44A2Q8IWA5 706 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF654Q8IZM8 581 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 FAM26EQ8N5C1 309 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 REPS2Q8NFH8 660 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PPP1R14CQ8TAE6 165 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 NPLOC4Q8TAT6 608 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 TNPO1Q92973 898 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ALPK1Q96QP1 1244 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 YIPF4Q9BSR8 244 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 KRTAP9-8Q9BYQ0 159 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PORCNQ9H237 461 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 MED4Q9NPJ6 270 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ST7Q9NRC1 585 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ANKEF1Q9NU02 776 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 ZNHIT6Q9NWK9 470 aaKnown RBP3.01□□□□□ -1.93
PRPF39-206ENST00000554429 SLC5A4Q9NY91 659 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 CLIP2Q9UDT6 1046 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms