RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 LXNQ9BS40 222 aa11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 LMAN2LQ9H0V9 348 aa11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 ELAC1Q9H777 363 aaKnown RBP11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 UPF2Q9HAU5 1272 aaKnown RBP11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 LRFN2Q9ULH4 789 aa11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 PCDHA12Q9UN75 941 aa11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
PTCD2P1-201ENST00000554393 XIRP2A4UGR9 3374 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 GAS2O43903 313 aaKnown RBP11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 LYPLA2O95372 231 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 RFC5P40937 340 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 FAM189BP81408 668 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 NCAPH2Q6IBW4 605 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 OTUD6AQ7L8S5 288 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 FBXO18Q8NFZ0 1043 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 NLRP7Q8WX94 980 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 SLC7A3Q8WY07 619 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 HLA-CQ95604 372 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 SCLT1Q96NL6 688 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 MTMR9Q96QG7 549 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 PPP1R16BQ96T49 567 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 GCOM2Q9BZD3 368 aaPredicted RBP11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 ZSWIM4Q9H7M6 989 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 WRAP73Q9P2S5 460 aaPredicted RBP11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 PCDHB7Q9Y5E2 793 aa11.65□□□□□ -0.54
PTCD2P1-201ENST00000554393 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 HOXA2O43364 376 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 ST18O60284 1047 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 YWHABP31946 246 aaKnown RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 DRP2Q13474 957 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 RSPH1Q8WYR4 309 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 CEP170P1Q96L14 293 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 HSD17B14Q9BPX1 270 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 INO80BQ9C086 356 aaPredicted RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 TTC12Q9H892 705 aaPredicted RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 CHST12Q9NRB3 414 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 SUCLA2Q9P2R7 463 aaPredicted RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
PTCD2P1-201ENST00000554393 WNT7AO00755 349 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 SLITRK3O94933 977 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 FOSBP53539 338 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 POLGP54098 1239 aaPredicted RBP11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 NPEPPSP55786 919 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 COL19A1Q14993 1142 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 RHPN2Q8IUC4 686 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 TCP11Q8WWU5 503 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 DYDC2Q96IM9 177 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 EIF2AK1Q9BQI3 630 aaKnown RBP11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 RGL1Q9NZL6 768 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 KIF3AQ9Y496 699 aa11.63□□□□□ -0.55
PTCD2P1-201ENST00000554393 A0A087WZ62 844 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 A0A0U1RQF3 1178 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 GRM6O15303 877 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 ASAP2O43150 1006 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 NCK2O43639 380 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 EOMESO95936 686 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 XRCC6P12956 609 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 BMP1P13497 986 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 TXKP42681 527 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 MCM2P49736 904 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 TFF2Q03403 129 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 CTTNQ14247 550 aaKnown RBP11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 PAN2Q504Q3 1202 aaKnown RBP11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 NOSTRINQ8IVI9 506 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 FDXACB1Q9BRP7 624 aaPredicted RBP11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 LRFN3Q9BTN0 628 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 TMEM117Q9H0C3 514 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 UBE2ZQ9H832 354 aaPredicted RBP11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 AAASQ9NRG9 546 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 ANKEF1Q9NU02 776 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 PLAGL2Q9UPG8 496 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
PTCD2P1-201ENST00000554393 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 TBKBP1A7MCY6 615 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 SKIP12755 728 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 MCM7P33993 719 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms