RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PON1P27169 355 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 MAEAQ7L5Y9 396 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 CATSPER3Q86XQ3 398 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 CNBD1Q8NA66 436 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 FAM167BQ9BTA0 163 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 EPB41L4BQ9H329 900 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 STK38LQ9Y2H1 464 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 ROBO3Q96MS0 1386 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 BTNL10A8MVZ5 291 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 AP1G2O75843 785 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 GRAPQ13588 217 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 BLMHQ13867 455 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 GRAPLQ8TC17 118 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ZNF287Q9HBT7 754 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 AIPL1Q9NZN9 384 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ARMCX3Q9UH62 379 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 PCDHA1Q9Y5I3 950 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 EIF4E1BA6NMX2 242 aaKnown RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 TMEM110-MUSTN1A8MSY1 372 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 HGSO14964 777 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 GCNT3O95395 438 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 KRT16P08779 473 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ARHGAP44Q17R89 818 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ATP8B4Q8TF62 1192 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 RPGRQ92834 1020 aaKnown RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 KLHL29Q96CT2 875 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 SH2D3AQ9BRG2 576 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 BHMT2Q9H2M3 363 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ETAA1Q9NY74 926 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 TAS2R14Q9NYV8 317 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 LINGO3P0C6S8 592 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 TRIM49P0CI25 452 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 TRIM49CP0CI26 452 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ABL2P42684 1182 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ZNF543Q08ER8 600 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 PDIA5Q14554 519 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 IFI16Q16666 785 aaKnown RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ANKRD20A2Q5SQ80 823 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ANKRD20A1Q5TYW2 823 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 ANKRD20A3Q5VUR7 823 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 PGM2Q96G03 612 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
PPP4R3A-202ENST00000554390 RGS16O15492 202 aaPredicted RBP18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 FGGP02679 453 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 NMT1P30419 496 aaKnown RBP18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 SLCO1A2P46721 670 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 NBPF20Q3BBV1 942 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 RASGEF1CQ8N431 466 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 TPCN2Q8NHX9 752 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 PNMA6FA0A0J9YX94 578 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 FOXO6A8MYZ6 492 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 SNX3O60493 162 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 CPNE8Q86YQ8 564 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 NSRP1Q9H0G5 558 aaKnown RBP18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 KCNQ5Q9NR82 932 aa18.29■□□□□ 0.52
PPP4R3A-202ENST00000554390 NAV1Q8NEY1 1877 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 CCDC169A6NNP5 214 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 DDX3XO00571 662 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■□□□ 13.1
PPP4R3A-202ENST00000554390 EVI5O60447 810 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 UPP2O95045 317 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 NUDT17P0C025 328 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 POU5F1Q01860 360 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 RNF25Q96BH1 459 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 RUSC1Q9BVN2 902 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 DHX36Q9H2U1 1008 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 ERVK-5Q9HDB9 667 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 PPP1R9AQ9ULJ8 1098 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 LIN7AO14910 233 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 SNUPNO95149 360 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 XRCC5P13010 732 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 PMS2P54278 862 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 RWDD2BP57060 319 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 CTTNQ14247 550 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 RBBP5Q15291 538 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 SPDYCQ5MJ68 293 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 DENND2CQ68D51 928 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 NEK9Q8TD19 979 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 C8orf37Q96NL8 207 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 PABPC3Q9H361 631 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 ARHGEF10LQ9HCE6 1279 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 ACP6Q9NPH0 428 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 MAST2Q6P0Q8 1798 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 STRCQ7RTU9 1775 aa18.28■□□□□ 0.52
PPP4R3A-202ENST00000554390 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 GALNTL6Q49A17 601 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 ZNF746Q6NUN9 644 aaPredicted RBP18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 CCDC134Q9H6E4 229 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 THRAP3Q9Y2W1 955 aaKnown RBP18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 SMCHD1A6NHR9 2005 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 A6NHS1 94 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms