RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 VAV3Q9UKW4 847 aa24.57■■□□□ 1.52
RCCD1-202ENST00000554302 TPCN1Q9ULQ1 816 aa24.57■■□□□ 1.52
RCCD1-202ENST00000554302 FSD2A1L4K1 749 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 PFKFB2O60825 505 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 ATF7P17544 494 aaPredicted RBP24.56■■□□□ 1.52
RCCD1-202ENST00000554302 PSMC5P62195 406 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 KCNC3Q14003 757 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 KCNT2Q6UVM3 1135 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 VN1R2Q8NFZ6 395 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 FAM20AQ96MK3 541 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 SH2D3AQ9BRG2 576 aa24.56■■□□□ 1.52
RCCD1-202ENST00000554302 GCOM2Q9BZD3 368 aaPredicted RBP24.56■■□□□ 1.52
RCCD1-202ENST00000554302 BARX2Q9UMQ3 279 aaPredicted RBP24.56■■□□□ 1.52
RCCD1-202ENST00000554302 EML1O00423 815 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 PER2O15055 1255 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 LETM2Q2VYF4 491 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 TMEM184AQ6ZMB5 413 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 ZNF410Q86VK4 478 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 SCLT1Q96NL6 688 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 SLKQ9H2G2 1235 aaPredicted RBP24.55■■□□□ 1.52
RCCD1-202ENST00000554302 DACT1Q9NYF0 836 aa24.55■■□□□ 1.52
RCCD1-202ENST00000554302 A0A087WZ62 844 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 DDX11L8A8MPP1 907 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 CSDE1O75534 798 aaKnown RBP24.54■■□□□ 1.52
RCCD1-202ENST00000554302 CTDNEP1O95476 244 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 GCFC2P16383 781 aaKnown RBP24.54■■□□□ 1.52
RCCD1-202ENST00000554302 DNM2P50570 870 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 ANAPC15P60006 121 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 HERC4Q5GLZ8 1057 aaPredicted RBP24.54■■□□□ 1.52
RCCD1-202ENST00000554302 NEK8Q86SG6 692 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 ABI1Q8IZP0 508 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 FDXACB1Q9BRP7 624 aaPredicted RBP24.54■■□□□ 1.52
RCCD1-202ENST00000554302 GJB4Q9NTQ9 266 aa24.54■■□□□ 1.52
RCCD1-202ENST00000554302 CCDC194A0A1B0GVG4 234 aa24.53■■□□□ 1.52
RCCD1-202ENST00000554302 PPM1AP35813 382 aa24.53■■□□□ 1.52
RCCD1-202ENST00000554302 QARSP47897 775 aaKnown RBP24.53■■□□□ 1.52
RCCD1-202ENST00000554302 RBM10P98175 930 aaKnown RBP24.53■■□□□ 1.52
RCCD1-202ENST00000554302 RNF135Q8IUD6 432 aa24.53■■□□□ 1.52
RCCD1-202ENST00000554302 OXER1Q8TDS5 423 aa24.53■■□□□ 1.52
RCCD1-202ENST00000554302 HAS1Q92839 578 aa24.53■■□□□ 1.52
RCCD1-202ENST00000554302 NGRNQ9NPE2 291 aaKnown RBP24.53■■□□□ 1.52
RCCD1-202ENST00000554302 SUCLA2Q9P2R7 463 aaPredicted RBP24.53■■□□□ 1.52
RCCD1-202ENST00000554302 PUF60Q9UHX1 559 aaKnown RBP24.53■■□□□ 1.52
RCCD1-202ENST00000554302 LOC730098B7Z3J9 87 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 TBX3O15119 743 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 XBP1P17861 261 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 PBX3P40426 434 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 PHKA2P46019 1235 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 CBX2Q14781 532 aaPredicted RBP24.52■■□□□ 1.52
RCCD1-202ENST00000554302 HELQQ8TDG4 1101 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 RSPH1Q8WYR4 309 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 SUSD6Q92537 303 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 TCF25Q9BQ70 676 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 JPH2Q9BR39 696 aaPredicted RBP24.52■■□□□ 1.52
RCCD1-202ENST00000554302 INO80BQ9C086 356 aaPredicted RBP24.52■■□□□ 1.52
RCCD1-202ENST00000554302 CYP26B1Q9NR63 512 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 SPG21Q9NZD8 308 aa24.52■■□□□ 1.52
RCCD1-202ENST00000554302 WRAP73Q9P2S5 460 aaPredicted RBP24.52■■□□□ 1.52
RCCD1-202ENST00000554302 USP15Q9Y4E8 981 aaPredicted RBP24.52■■□□□ 1.52
RCCD1-202ENST00000554302 SFPQP23246 707 aaKnown RBP eCLIP24.51■■□□□ 1.51
RCCD1-202ENST00000554302 PLPP4Q5VZY2 271 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 PLA2G4FQ68DD2 849 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 RHPN2Q8IUC4 686 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 SLC39A11Q8N1S5 342 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 RNF169Q8NCN4 708 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 SPDYE1Q8NFV5 336 aaPredicted RBP24.51■■□□□ 1.51
RCCD1-202ENST00000554302 MUTYHQ9UIF7 546 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 PPME1Q9Y570 386 aa24.51■■□□□ 1.51
RCCD1-202ENST00000554302 HIDE1A8MVS5 230 aa24.5■■□□□ 1.51
RCCD1-202ENST00000554302 DKC1O60832 514 aaKnown RBP eCLIP24.5■■□□□ 1.51
RCCD1-202ENST00000554302 P4HBP07237 508 aaKnown RBP24.5■■□□□ 1.51
RCCD1-202ENST00000554302 KRT17Q04695 432 aa24.5■■□□□ 1.51
RCCD1-202ENST00000554302 EARS2Q5JPH6 523 aaKnown RBP24.5■■□□□ 1.51
RCCD1-202ENST00000554302 PIK3AP1Q6ZUJ8 805 aa24.5■■□□□ 1.51
RCCD1-202ENST00000554302 KSR1Q8IVT5 923 aa24.5■■□□□ 1.51
RCCD1-202ENST00000554302 NAP1L4Q99733 375 aaKnown RBP24.5■■□□□ 1.51
RCCD1-202ENST00000554302 MRPL9Q9BYD2 267 aaKnown RBP24.5■■□□□ 1.51
RCCD1-202ENST00000554302 IFT122Q9HBG6 1241 aa24.5■■□□□ 1.51
RCCD1-202ENST00000554302 CCNT1O60563 726 aaKnown RBP24.49■■□□□ 1.51
RCCD1-202ENST00000554302 DTNBO60941 627 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 ZNF623O75123 536 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 FDPSP14324 419 aaKnown RBP24.49■■□□□ 1.51
RCCD1-202ENST00000554302 AK2P54819 239 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 NPEPPSP55786 919 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 SPIRE1Q08AE8 756 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 ANKRD1Q15327 319 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 C4orf19Q8IY42 314 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 ZNF579Q8NAF0 562 aaKnown RBP24.49■■□□□ 1.51
RCCD1-202ENST00000554302 PHF7Q9BWX1 381 aaPredicted RBP24.49■■□□□ 1.51
RCCD1-202ENST00000554302 S1PR5Q9H228 398 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 DHX33Q9H6R0 707 aaKnown RBP24.49■■□□□ 1.51
RCCD1-202ENST00000554302 ENTPD7Q9NQZ7 604 aa24.49■■□□□ 1.51
RCCD1-202ENST00000554302 WDFY4Q6ZS81 3184 aa24.48■■□□□ 1.51
RCCD1-202ENST00000554302 SKIP12755 728 aa24.48■■□□□ 1.51
RCCD1-202ENST00000554302 EPHA7Q15375 998 aa24.48■■□□□ 1.51
RCCD1-202ENST00000554302 EXOC8Q8IYI6 725 aa24.48■■□□□ 1.51
RCCD1-202ENST00000554302 TNFRSF25Q93038 417 aa24.48■■□□□ 1.51
RCCD1-202ENST00000554302 ORC3Q9UBD5 711 aaPredicted RBP24.48■■□□□ 1.51
RCCD1-202ENST00000554302 BCAR1P56945 870 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms