RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 HELZ2Q9BYK8 2649 aaKnown RBP19.24■□□□□ 0.67
NEK9-204ENST00000554258 COL4A3Q01955 1670 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 WDFY3Q8IZQ1 3526 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 FAM170BA6NMN3 283 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 ZBTB5O15062 677 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 SEC24BO95487 1268 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 RETP07949 1114 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 KLRC2P26717 231 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 HAND2P61296 217 aa19.24■□□□□ 0.67
NEK9-204ENST00000554258 SNW1Q13573 536 aaKnown RBP19.24■□□□□ 0.67
NEK9-204ENST00000554258 FAM126AQ9BYI3 521 aaPredicted RBP19.24■□□□□ 0.67
NEK9-204ENST00000554258 MTF2Q9Y483 593 aaPredicted RBP19.24■□□□□ 0.67
NEK9-204ENST00000554258 RBM8AQ9Y5S9 174 aaKnown RBP19.24■□□□□ 0.67
NEK9-204ENST00000554258 PCP11498 1178 aaKnown RBP19.23■□□□□ 0.67
NEK9-204ENST00000554258 CLCN4P51793 760 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 CLLU1OSQ5K130 101 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 DDX53Q86TM3 631 aaKnown RBP19.23■□□□□ 0.67
NEK9-204ENST00000554258 KDF1Q8NAX2 398 aaPredicted RBP19.23■□□□□ 0.67
NEK9-204ENST00000554258 CMASQ8NFW8 434 aaPredicted RBP19.23■□□□□ 0.67
NEK9-204ENST00000554258 BBXQ8WY36 941 aaPredicted RBP19.23■□□□□ 0.67
NEK9-204ENST00000554258 ESR2Q92731 530 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 KCNB2Q92953 911 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 EMILIN2Q9BXX0 1053 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 OSBPL6Q9BZF3 934 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 AZI2Q9H6S1 392 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 LHX6Q9UPM6 363 aa19.23■□□□□ 0.67
NEK9-204ENST00000554258 DMXL2Q8TDJ6 3036 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 NAV2Q8IVL1 2488 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 CCDC195A0A1B0GUA6 201 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 ATP9AO75110 1047 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 TRAF1Q13077 416 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 HTR4Q13639 388 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 DSC3Q14574 896 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 WTAPQ15007 396 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 CSRP2Q16527 193 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 MTHFD1LQ6UB35 978 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 FAM228AQ86W67 206 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 TMEM173Q86WV6 379 aaPredicted RBP19.22■□□□□ 0.67
NEK9-204ENST00000554258 ST13P5Q8NFI4 369 aaPredicted RBP19.22■□□□□ 0.67
NEK9-204ENST00000554258 MYL10Q9BUA6 226 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 DDX23Q9BUQ8 820 aaKnown RBP19.22■□□□□ 0.67
NEK9-204ENST00000554258 MRPL9Q9BYD2 267 aaKnown RBP19.22■□□□□ 0.67
NEK9-204ENST00000554258 NUMBLQ9Y6R0 609 aa19.22■□□□□ 0.67
NEK9-204ENST00000554258 ANHXE9PGG2 379 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 LAMP2P13473 410 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 KCNA2P16389 499 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 GPC5P78333 572 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 ITPR1Q14643 2758 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 MLF2Q15773 248 aaPredicted RBP19.21■□□□□ 0.67
NEK9-204ENST00000554258 CCDC178Q5BJE1 867 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 PCNX4Q63HM2 1172 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 PRR23BQ6ZRT6 265 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 IQCA1Q86XH1 822 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 HOMER1Q86YM7 354 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 CELF5Q8N6W0 485 aaKnown RBP19.21■□□□□ 0.67
NEK9-204ENST00000554258 HELQQ8TDG4 1101 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 MTMR8Q96EF0 704 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 MAN1C1Q9NR34 630 aa19.21■□□□□ 0.67
NEK9-204ENST00000554258 ZNF213O14771 459 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 FOXD2O60548 495 aaPredicted RBP19.2■□□□□ 0.66
NEK9-204ENST00000554258 ZC3H11AO75152 810 aaKnown RBP eCLIP19.2■□□□□ 0.66
NEK9-204ENST00000554258 CYP21A2P08686 494 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 PRKCQQ04759 706 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 RING1Q06587 406 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 IMMTQ16891 758 aaKnown RBP19.2■□□□□ 0.66
NEK9-204ENST00000554258 TSGA10IPQ3SY00 556 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 ZBTB41Q5SVQ8 909 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 CYP26C1Q6V0L0 522 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 ECHDC2Q86YB7 292 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 STAG2Q8N3U4 1231 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 CDHR1Q96JP9 859 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 KLHL5Q96PQ7 755 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 PPP1R16BQ96T49 567 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 PCYT2Q99447 389 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 OSMRQ99650 979 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 PRMT8Q9NR22 394 aaPredicted RBP19.2■□□□□ 0.66
NEK9-204ENST00000554258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.2■□□□□ 0.66
NEK9-204ENST00000554258 PKD2L1Q9P0L9 805 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 SDK1Q7Z5N4 2213 aa19.2■□□□□ 0.66
NEK9-204ENST00000554258 SMG1Q96Q15 3661 aaKnown RBP19.19■□□□□ 0.66
NEK9-204ENST00000554258 AKAP13Q12802 2813 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 KLRF2D3W0D1 207 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 ZIC2O95409 532 aaPredicted RBP19.19■□□□□ 0.66
NEK9-204ENST00000554258 CNPP09543 421 aaKnown RBP19.19■□□□□ 0.66
NEK9-204ENST00000554258 KLRC1P26715 233 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 HSPA4P34932 840 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 KIZQ2M2Z5 673 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 CREB3L3Q68CJ9 461 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 GET4Q7L5D6 327 aaPredicted RBP19.19■□□□□ 0.66
NEK9-204ENST00000554258 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 SMG7Q92540 1137 aaKnown RBP19.19■□□□□ 0.66
NEK9-204ENST00000554258 GPRASP2Q96D09 838 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 IGSF21Q96ID5 467 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 RNF41Q9H4P4 317 aaPredicted RBP19.19■□□□□ 0.66
NEK9-204ENST00000554258 LTB4R2Q9NPC1 389 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 LOC400499M0QZD8 3231 aa19.19■□□□□ 0.66
NEK9-204ENST00000554258 SLC27A2O14975 620 aa19.18■□□□□ 0.66
NEK9-204ENST00000554258 INPPL1O15357 1258 aa19.18■□□□□ 0.66
NEK9-204ENST00000554258 ZSCAN20P17040 1043 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms