RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 GFM2Q969S9 779 aaKnown RBP6.72□□□□□ -1.33
ATXN3-225ENST00000554214 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 OR14A2Q96R54 314 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 CDK5RAP1Q96SZ6 601 aaKnown RBP6.72□□□□□ -1.33
ATXN3-225ENST00000554214 SYNPO2Q9UMS6 1093 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 ABCC8Q09428 1581 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 FGD5Q6ZNL6 1462 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 C1QTNF3-AMACRE9PGA6 284 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 MAFGO15525 162 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 PDE8AO60658 829 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 FKBP9O95302 570 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 RPS19P39019 145 aaKnown RBP6.71□□□□□ -1.34
ATXN3-225ENST00000554214 SELENOPP49908 381 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 IL2P60568 153 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 OCRLQ01968 901 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 ACAP1Q15027 740 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 CDSNQ15517 529 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 FKBP9P1Q75LS8 142 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 BMP8AQ7Z5Y6 402 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 GPR135Q8IZ08 494 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 LPPQ93052 612 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-225ENST00000554214 SEMA4AQ9H3S1 761 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 MAPRE3Q9UPY8 281 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 TMA7Q9Y2S6 64 aaKnown RBP6.71□□□□□ -1.34
ATXN3-225ENST00000554214 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 RBM8AQ9Y5S9 174 aaKnown RBP6.71□□□□□ -1.34
ATXN3-225ENST00000554214 PBRM1Q86U86 1689 aa6.71□□□□□ -1.34
ATXN3-225ENST00000554214 A0A0A6YYJ9 748 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 C2orf78A6NCI8 922 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 SLC26A4O43511 780 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 COMTP21964 271 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 HSD3B2P26439 372 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 ADCYAP1R1P41586 468 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 LSSP48449 732 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 ADCY7P51828 1080 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 SDE2Q6IQ49 451 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 KIAA1841Q6NSI8 718 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 C11orf74Q86VG3 221 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 PALM2Q8IXS6 379 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 SH3RF3Q8TEJ3 882 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-225ENST00000554214 GCDHQ92947 438 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-225ENST00000554214 NKD2Q969F2 451 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-225ENST00000554214 WDR92Q96MX6 357 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 SLKQ9H2G2 1235 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-225ENST00000554214 NELFAQ9H3P2 528 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 MTG2Q9H4K7 406 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
ATXN3-225ENST00000554214 DNAI1Q9UI46 699 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 MSRAQ9UJ68 235 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 JAG2Q9Y219 1238 aa6.7□□□□□ -1.34
ATXN3-225ENST00000554214 SYNJ2O15056 1496 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 PMS2P1A4D2B8 440 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 GOLGA8BA8MQT2 603 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 ELL2O00472 640 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-225ENST00000554214 MUSKO15146 869 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 DAPK3O43293 454 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 LSP1P33241 339 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 STAT3P40763 770 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 DUSP8Q13202 625 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 GRM7Q14831 915 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 Q6ZSN1 163 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 ESPNLQ6ZVH7 1005 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 DDX46Q7L014 1031 aaKnown RBP6.69□□□□□ -1.34
ATXN3-225ENST00000554214 POLNQ7Z5Q5 900 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 SPRED1Q7Z699 444 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 ZNF610Q8N9Z0 462 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 RABGGTAQ92696 567 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 RPL10LQ96L21 214 aaKnown RBP6.69□□□□□ -1.34
ATXN3-225ENST00000554214 ADOQ96SZ5 270 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 NOL10Q9BSC4 688 aaKnown RBP6.69□□□□□ -1.34
ATXN3-225ENST00000554214 SLC6A15Q9H2J7 730 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 MSL2Q9HCI7 577 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 PLA2G3Q9NZ20 509 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 TESMINQ9Y4I5 508 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 SLC30A1Q9Y6M5 507 aa6.69□□□□□ -1.34
ATXN3-225ENST00000554214 GRIN2BQ13224 1484 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 MAGI1Q96QZ7 1491 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 CUX1P39880 1505 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 ACO1P21399 889 aaKnown RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 FOXL1Q12952 345 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 R3HDM1Q15032 1099 aaKnown RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 TERF2Q15554 542 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 GPR158Q5T848 1215 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 PLA2G15Q8NCC3 412 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 SLC7A6OSQ96CW6 309 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 TMEM176AQ96HP8 235 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 POLR3BQ9NW08 1133 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 USP36Q9P275 1121 aaKnown RBP6.68□□□□□ -1.34
ATXN3-225ENST00000554214 MYPNQ86TC9 1320 aa6.68□□□□□ -1.34
ATXN3-225ENST00000554214 CEP170Q5SW79 1584 aa6.67□□□□□ -1.34
ATXN3-225ENST00000554214 LCHNA4D1U4 455 aa6.67□□□□□ -1.34
ATXN3-225ENST00000554214 OPHN1O60890 802 aa6.67□□□□□ -1.34
ATXN3-225ENST00000554214 PCDH8O95206 1070 aa6.67□□□□□ -1.34
ATXN3-225ENST00000554214 HNRNPLP14866 589 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATXN3-225ENST00000554214 MSX2P35548 267 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-225ENST00000554214 BPIFB4P59827 614 aa6.67□□□□□ -1.34
ATXN3-225ENST00000554214 PHC1P78364 1004 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms