RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 HNRNPDLO14979 420 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ADAMTS3O15072 1205 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 GRM6O15303 877 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 SLC16A4O15374 487 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 BNIP3LO60238 219 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 HBP1O60381 514 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 NPTXRO95502 500 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 PCP11498 1178 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ANP32AP39687 249 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 SCNN1GP51170 649 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 YARSP54577 528 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 TFAMQ00059 246 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 MAP3K10Q02779 954 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 PTGDRQ13258 359 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 SUZ12Q15022 739 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 SEC23AQ15436 765 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 TPD52L1Q16890 204 aaPredicted RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 TCEAL5Q5H9L2 206 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 TTC38Q5R3I4 469 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 LIN9Q5TKA1 542 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 KCNV1Q6PIU1 500 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 PRR23CQ6ZRP0 262 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 GET4Q7L5D6 327 aaPredicted RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 KRT25Q7Z3Z0 450 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 SUGP1Q8IWZ8 645 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 HACE1Q8IYU2 909 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 KIAA0319LQ8IZA0 1049 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 RIN2Q8WYP3 895 aaPredicted RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ERCC4Q92889 916 aaPredicted RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ELMO3Q96BJ8 720 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 DHX58Q96C10 678 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 FAM84AQ96KN4 292 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 RAD9AQ99638 391 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 GPR20Q99678 358 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 WNT8AQ9H1J5 351 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 TTYH1Q9H313 450 aaPredicted RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 BARHL2Q9NY43 387 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 LIMD1Q9UGP4 676 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 GTF2IRD1Q9UHL9 959 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 NDRG2Q9UN36 371 aaKnown RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 DNM3Q9UQ16 869 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 FAN1Q9Y2M0 1017 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ARIH1Q9Y4X5 557 aaPredicted RBP2.78□□□□□ -1.97
PRPF39-205ENST00000554081 CACNA1IQ9P0X4 2223 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ADAMTSL1Q8N6G6 1762 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PAPPA2Q9BXP8 1791 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TRIP12Q14669 1992 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 KAT6AQ92794 2004 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MEIS3P2A8K0S8 358 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 H0Y858 1186 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 BIN1O00499 593 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 DPYSL4O14531 572 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GPR182O15218 404 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NKRFO15226 690 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MSH4O15457 936 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TPD52L2O43399 206 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 SLC37A4O43826 429 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NBNO60934 754 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ALDH2P05091 517 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ITGA4P13612 1032 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GJA1P17302 382 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 EIF4BP23588 611 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MCM4P33991 863 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MLH1P40692 756 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 LIFRP42702 1097 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 QARSP47897 775 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 WDR5P61964 334 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ADGRE1Q14246 886 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 UBXN2BQ14CS0 331 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 AAK1Q2M2I8 961 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 UVSSAQ2YD98 709 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 HERC4Q5GLZ8 1057 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ODR4Q5SWX8 454 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 MAP3K21Q5TCX8 1036 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 FAM171A1Q5VUB5 890 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 DSTYKQ6XUX3 929 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 HS2ST1Q7LGA3 356 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 CABP7Q86V35 215 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GIMAP8Q8ND71 665 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 URGCPQ8TCY9 931 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PBXIP1Q96AQ6 731 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PCMTD1Q96MG8 357 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 CELF4Q9BZC1 486 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PDCL3Q9H2J4 239 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 UNC45AQ9H3U1 944 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GOLGA2P5Q9HBQ8 144 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 TLR9Q9NR96 1032 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 AAASQ9NRG9 546 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 PHF24Q9UPV7 400 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 DIS3Q9Y2L1 958 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF462Q96JM2 2506 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 IGF2RP11717 2491 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GRIN2DO15399 1336 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NRCAMQ92823 1304 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 VIRMAQ69YN4 1812 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 NPHP3-ACAD11A0A0J9YXS1 232 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 STXBP3O00186 592 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GAS2O43903 313 aaKnown RBP2.77□□□□□ -1.97
PRPF39-205ENST00000554081 KPNA6O60684 536 aa2.77□□□□□ -1.97
PRPF39-205ENST00000554081 GJB5O95377 273 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms