RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SDF4Q9BRK5 362 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
PRKCH-208ENST00000553846 FBXL21Q9UKT6 434 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 SPDYE3A6NKU9 549 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 MEIS3P2A8K0S8 358 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 ANHXE9PGG2 379 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 FAM86B1E9PN63 330 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 DCNP07585 359 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 CNPP09543 421 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 FAM86B2P0C5J1 330 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 SRFP11831 508 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 CLK2P49760 499 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 GPC3P51654 580 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 ATXN1P54253 815 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 NLRP11P59045 1033 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 C1orf210Q8IVY1 113 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 TEX2Q8IWB9 1127 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 ABI1Q8IZP0 508 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 PJA1Q8NG27 643 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 RSPH1Q8WYR4 309 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF707Q96C28 371 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 TMEM169Q96HH4 297 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 KLHL5Q96PQ7 755 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 MYADMQ96S97 322 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 NRDE2Q9H7Z3 1164 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 WDR6Q9NNW5 1121 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF302Q9NR11 478 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 SLC2A4RGQ9NR83 387 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 TBC1D13Q9NVG8 400 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 SEC63Q9UGP8 760 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 DOCK6Q96HP0 2047 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 MYH15Q9Y2K3 1946 aa10.32□□□□□ -0.76
PRKCH-208ENST00000553846 CNOT1A5YKK6 2376 aaKnown RBP10.32□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF862O60290 1169 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ZC3H11AO75152 810 aaKnown RBP eCLIP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 KIF5BP33176 963 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 PHKA2P46019 1235 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 SLC11A1P49279 550 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ALDH7A1P49419 539 aaKnown RBP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 NUCB1Q02818 461 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 FUT2Q10981 343 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 TRDNQ13061 729 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 HTR4Q13639 388 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF528Q3MIS6 628 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 FAM160B1Q5W0V3 765 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 WWC2Q6AWC2 1192 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ZC3H14Q6PJT7 736 aaKnown RBP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 TMTC3Q6ZXV5 915 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 PPFIBP1Q86W92 1011 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 CHD1LQ86WJ1 897 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 CTCFLQ8NI51 663 aaPredicted RBP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 GPR152Q8TDT2 470 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 PGBD1Q96JS3 809 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 CEP89Q96ST8 783 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 MTA3Q9BTC8 594 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 DDX23Q9BUQ8 820 aaKnown RBP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ARHGEF3Q9NR81 526 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 DNAJB4Q9UDY4 337 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 CA14Q9ULX7 337 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ANKRD11Q6UB99 2663 aaPredicted RBP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
PRKCH-208ENST00000553846 CLUHO75153 1309 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 CNTNAP5Q8WYK1 1306 aa10.31□□□□□ -0.76
PRKCH-208ENST00000553846 ERICH2A1L162 156 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 SH2B2O14492 632 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-208ENST00000553846 BACH1O14867 736 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 LILRB5O75023 590 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 LRRN2O75325 713 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
PRKCH-208ENST00000553846 FGFR4P22455 802 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 STARD6P59095 220 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 DRP2Q13474 957 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 SART3Q15020 963 aaKnown RBP10.3□□□□□ -0.76
PRKCH-208ENST00000553846 SWSAP1Q6NVH7 229 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 CYP26C1Q6V0L0 522 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 LRRC71Q8N4P6 559 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 RNF169Q8NCN4 708 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 ZBTB44Q8NCP5 570 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 NCOA7Q8NI08 942 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 NXPE3Q969Y0 559 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 ANO3Q9BYT9 981 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 FOXQ1Q9C009 403 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 RIC8AQ9NPQ8 531 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-208ENST00000553846 SIT1Q9Y3P8 196 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 LAMA1P25391 3075 aa10.3□□□□□ -0.76
PRKCH-208ENST00000553846 FASNP49327 2511 aaKnown RBP10.3□□□□□ -0.76
PRKCH-208ENST00000553846 DDX39AO00148 427 aaKnown RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 IPO5O00410 1097 aaKnown RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 ADAMTS3O15072 1205 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 SPTLC1O15269 473 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 MAGEB2O15479 319 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF623O75123 536 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 CSDE1O75534 798 aaKnown RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 OFD1O75665 1012 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms