RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 DLK2Q6UY11 383 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 PIK3AP1Q6ZUJ8 805 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 MOB2Q70IA6 237 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ANKRD23Q86SG2 305 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CPXCR1Q8N123 301 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CHST13Q8NET6 341 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 SYAP1Q96A49 352 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 WNK4Q96J92 1243 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CLMNQ96JQ2 1002 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 MPHOSPH6Q99547 160 aaKnown RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CPVLQ9H3G5 476 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 SUGCTQ9HAC7 445 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 LIN7BQ9HAP6 207 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ZFYVE28Q9HCC9 887 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ZCCHC17Q9NP64 241 aaKnown RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 BIN2Q9UBW5 565 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 PCDHA6Q9UN73 950 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ADAMTS5Q9UNA0 930 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 MORC2Q9Y6X9 1032 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ELP1O95163 1332 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CCL15-CCL14A0A0B4J2E2 113 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 SPTLC2O15270 562 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 MARCH6O60337 910 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CUTAO60888 179 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 LETM1O95202 739 aaPredicted RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CFBP00751 764 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ALAS1P13196 640 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 DRD2P14416 443 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 GCFC2P16383 781 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ATP2B1P20020 1258 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ZNF76P36508 570 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 NASPP49321 788 aaPredicted RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 UBE2HP62256 183 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CCNA1P78396 465 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 SREBF2Q12772 1141 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 PLS1Q14651 629 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CCL15Q16663 113 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 SLC35G1Q2M3R5 365 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 TTC38Q5R3I4 469 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 JAKMIP3Q5VZ66 844 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ARL6IP4Q66PJ3 421 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ADALQ6DHV7 355 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 PHLDB3Q6NSJ2 640 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CDPF1Q6NVV7 123 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 NEK8Q86SG6 692 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 SAPCD2Q86UD0 394 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CCAR1Q8IX12 1150 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 LINC00301Q8NCQ3 95 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 FERMT2Q96AC1 680 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ATG4CQ96DT6 458 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CCDC34Q96HJ3 373 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 P2RX7Q99572 595 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 TEX13BQ9BXU2 312 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 RAB34Q9BZG1 259 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 RAVER2Q9HCJ3 691 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 GJB4Q9NTQ9 266 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 FBXO28Q9NVF7 368 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 ABT1Q9ULW3 272 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 CNPY2Q9Y2B0 182 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 DDX49Q9Y6V7 483 aaKnown RBP5.67□□□□□ -1.5
VTI1B-202ENST00000553619 PASKQ96RG2 1323 aa5.67□□□□□ -1.5
VTI1B-202ENST00000553619 FAM95CA0A1B0GW59 222 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 KIF28PB7ZC32 967 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 PDHXO00330 501 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 MEIS2O14770 477 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 MAFGO15525 162 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 FIBPO43427 364 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CCNT1O60563 726 aaKnown RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 PPP1R11O60927 126 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CPNE3O75131 537 aaKnown RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CYP11A1P05108 521 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CYP3A4P08684 503 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 TXKP42681 527 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 ME1P48163 572 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 SNAP25P60880 206 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 HERVK_113P62684 666 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CEBPZQ03701 1054 aaKnown RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 FMR1Q06787 632 aaKnown RBP eCLIP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 ZNF174Q15697 407 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 NPY5RQ15761 445 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 MSMPQ1L6U9 139 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 INF2Q27J81 1249 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 TMEM266Q2M3C6 531 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 DEFB115Q30KQ5 88 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 SNRNP48Q6IEG0 339 aaKnown RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 PPP4R3AQ6IN85 833 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 XRRA1Q6P2D8 792 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 FAM173BQ6P4H8 233 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 MOXD1Q6UVY6 613 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 RNF207Q6ZRF8 634 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 RASGRP2Q7LDG7 609 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 RIOX2Q8IUF8 465 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 SLFN12Q8IYM2 578 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 ABI1Q8IZP0 508 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 C2CD4AQ8NCU7 369 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 TBCKQ8TEA7 893 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms