RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 POLR3CQ9BUI4 534 aaPredicted RBP26.28■■□□□ 1.8
TDP1-205ENST00000553527 ATP6V0A4Q9HBG4 840 aa26.28■■□□□ 1.8
TDP1-205ENST00000553527 DAXXQ9UER7 740 aaPredicted RBP26.28■■□□□ 1.8
TDP1-205ENST00000553527 LRWD1Q9UFC0 647 aa26.28■■□□□ 1.8
TDP1-205ENST00000553527 KIAA1671Q9BY89 1806 aa26.28■■□□□ 1.8
TDP1-205ENST00000553527 A0A0C4DFX4 3053 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 TBKBP1A7MCY6 615 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 FGFR1P11362 822 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 SFPQP23246 707 aaKnown RBP eCLIP26.27■■□□□ 1.8
TDP1-205ENST00000553527 CCT6AP40227 531 aaKnown RBP26.27■■□□□ 1.8
TDP1-205ENST00000553527 RILPL1Q5EBL4 403 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 CATSPER4Q7RTX7 472 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 FERMT3Q86UX7 667 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 CMTR2Q8IYT2 770 aaKnown RBP26.27■■□□□ 1.8
TDP1-205ENST00000553527 NACC1Q96RE7 527 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 IFT122Q9HBG6 1241 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 XPNPEP1Q9NQW7 623 aa26.27■■□□□ 1.8
TDP1-205ENST00000553527 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.27■■□□□ 1.8
TDP1-205ENST00000553527 RNF216Q9NWF9 866 aaPredicted RBP26.27■■□□□ 1.8
TDP1-205ENST00000553527 RBM19Q9Y4C8 960 aaKnown RBP26.27■■□□□ 1.8
TDP1-205ENST00000553527 MRPL42Q9Y6G3 142 aaKnown RBP26.27■■□□□ 1.8
TDP1-205ENST00000553527 MYH15Q9Y2K3 1946 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 STX6O43752 255 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 GAS2O43903 313 aaKnown RBP26.26■■□□□ 1.79
TDP1-205ENST00000553527 USO1O60763 962 aaKnown RBP26.26■■□□□ 1.79
TDP1-205ENST00000553527 DGAT1O75907 488 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 XRCC6P12956 609 aaKnown RBP eCLIP26.26■■□□□ 1.79
TDP1-205ENST00000553527 RPA1P27694 616 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 BMPR1AP36894 532 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 FXR2P51116 673 aaKnown RBP eCLIP26.26■■□□□ 1.79
TDP1-205ENST00000553527 FAM43BQ6ZT52 329 aaPredicted RBP26.26■■□□□ 1.79
TDP1-205ENST00000553527 RNF149Q8NC42 400 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 TMEM161AQ9NX61 479 aa26.26■■□□□ 1.79
TDP1-205ENST00000553527 COL4A6Q14031 1691 aa26.25■■□□□ 1.79
TDP1-205ENST00000553527 H3BNC9 293 aa26.25■■□□□ 1.79
TDP1-205ENST00000553527 ASAP2O43150 1006 aa26.25■■□□□ 1.79
TDP1-205ENST00000553527 CSPG5O95196 566 aa26.25■■□□□ 1.79
TDP1-205ENST00000553527 FAM189BP81408 668 aa26.25■■□□□ 1.79
TDP1-205ENST00000553527 SPOUT1Q5T280 376 aaKnown RBP26.25■■□□□ 1.79
TDP1-205ENST00000553527 DTHD1Q6ZMT9 781 aa26.25■■□□□ 1.79
TDP1-205ENST00000553527 PIN4Q9Y237 131 aaKnown RBP26.25■■□□□ 1.79
TDP1-205ENST00000553527 LINC00271P0C7V0 271 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 IL17AQ16552 155 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 LONRF3Q496Y0 759 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 HAUS3Q68CZ6 603 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 TWF2Q6IBS0 349 aaKnown RBP26.24■■□□□ 1.79
TDP1-205ENST00000553527 ECHDC2Q86YB7 292 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 RAB34Q9BZG1 259 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 MINDY3Q9H8M7 445 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 DACT1Q9NYF0 836 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 RWDD3Q9Y3V2 267 aa26.24■■□□□ 1.79
TDP1-205ENST00000553527 PP2D1A8MPX8 630 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 LAD1O00515 517 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 CDC25AP30304 524 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 PDIA5Q14554 519 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 ECM1Q16610 540 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 SRGAP1Q7Z6B7 1085 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 ASAP3Q8TDY4 903 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 SNX29Q8TEQ0 813 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 CLP1Q92989 425 aaKnown RBP26.23■■□□□ 1.79
TDP1-205ENST00000553527 ELAC1Q9H777 363 aaKnown RBP26.23■■□□□ 1.79
TDP1-205ENST00000553527 CHST12Q9NRB3 414 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 LMCD1Q9NZU5 365 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 KIAA1024Q9UPX6 916 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 MTMR6Q9Y217 621 aa26.23■■□□□ 1.79
TDP1-205ENST00000553527 PDIA4P13667 645 aaKnown RBP26.22■■□□□ 1.79
TDP1-205ENST00000553527 MXD4Q14582 209 aaPredicted RBP26.22■■□□□ 1.79
TDP1-205ENST00000553527 POLR3FQ9H1D9 316 aaPredicted RBP26.22■■□□□ 1.79
TDP1-205ENST00000553527 GPRC5CQ9NQ84 441 aa26.22■■□□□ 1.79
TDP1-205ENST00000553527 DBR1Q9UK59 544 aaKnown RBP26.22■■□□□ 1.79
TDP1-205ENST00000553527 MYO7AQ13402 2215 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 A0A0U1RQF3 1178 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 ARHGEF35A5YM69 484 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 RB1P06400 928 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 ARL2P36404 184 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 PHKA2P46019 1235 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 TFDP1Q14186 410 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 ZRSR1Q15695 479 aaKnown RBP26.21■■□□□ 1.79
TDP1-205ENST00000553527 PTPROQ16827 1216 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 ABI1Q8IZP0 508 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 IGSF22Q8N9C0 903 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 C11orf84Q9BUA3 381 aaPredicted RBP26.21■■□□□ 1.79
TDP1-205ENST00000553527 ALG13Q9NP73 1137 aaKnown RBP26.21■■□□□ 1.79
TDP1-205ENST00000553527 DDX19AQ9NUU7 478 aaKnown RBP26.21■■□□□ 1.79
TDP1-205ENST00000553527 HCSTQ9UBK5 93 aa26.21■■□□□ 1.79
TDP1-205ENST00000553527 C5orf67F2Z3F1 127 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 GRM6O15303 877 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 PRPHP41219 470 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 ATP2C1P98194 919 aaPredicted RBP26.2■■□□□ 1.78
TDP1-205ENST00000553527 KRT79Q5XKE5 535 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 PADI6Q6TGC4 694 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 BRAPQ7Z569 592 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 MRPL38Q96DV4 380 aaKnown RBP26.2■■□□□ 1.78
TDP1-205ENST00000553527 POLD4Q9HCU8 107 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 TYW1Q9NV66 732 aaKnown RBP26.2■■□□□ 1.78
TDP1-205ENST00000553527 THEGQ9P2T0 379 aa26.2■■□□□ 1.78
TDP1-205ENST00000553527 VWA3AA6NCI4 1184 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 INO80B-WBP1J3KQ70 363 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 ERLIN2O94905 339 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 GLRA2P23416 452 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms