RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 MBD1Q9UIS9 605 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SMG5Q9UPR3 1016 aaKnown RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 TAF6LQ9Y6J9 622 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SRCAPQ6ZRS2 3230 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 IBTKQ9P2D0 1353 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CDHR2Q9BYE9 1310 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 DDNO94850 711 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 SNRPB2P08579 225 aaKnown RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 NBPF7P0C2Y1 421 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 HOXC12P31275 282 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 CCT4P50991 539 aaKnown RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 GPSM2P81274 684 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 CYP4F8P98187 520 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 LAPTM5Q13571 262 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 KCNA10Q16322 511 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 HLA-DQA1Q5Y7H0 255 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 ZKSCAN2Q63HK3 967 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 CYP2R1Q6VVX0 501 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 NIM1KQ8IY84 436 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 GPR101Q96P66 508 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 IPO9Q96P70 1041 aaKnown RBP5.79□□□□□ -1.48
ATXN3-220ENST00000553491 SGPP1Q9BX95 441 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 TNNQ9UQP3 1299 aa5.79□□□□□ -1.48
ATXN3-220ENST00000553491 SCN4AP35499 1836 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 NPIPB6E9PJ23 425 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 STXBP3O00186 592 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 TAF5LO75529 589 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 RAD17O75943 681 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 UFL1O94874 794 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 SCG5P05408 212 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 UBTFL1P0CB47 393 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-220ENST00000553491 VIPR1P32241 457 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 ECI1P42126 302 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 PRELPP51888 382 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 SUMO1P63165 101 aaKnown RBP5.78□□□□□ -1.48
ATXN3-220ENST00000553491 FOXO4P98177 505 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 PRSS53Q2L4Q9 553 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 EPHA10Q5JZY3 1008 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 LDHAL6AQ6ZMR3 332 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 ITPRIPQ8IWB1 547 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 TMEM145Q8NBT3 493 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 NUP43Q8NFH3 380 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 SUCLG2Q96I99 432 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 CCDC140Q96MF4 163 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 TOX2Q96NM4 488 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 EYA3Q99504 573 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 USP44Q9H0E7 712 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 CNTD2Q9H8S5 307 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 DBNDD1Q9H9R9 158 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 NCOA5Q9HCD5 579 aaKnown RBP5.78□□□□□ -1.48
ATXN3-220ENST00000553491 NMRK2Q9NPI5 230 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 RCAN3Q9UKA8 241 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 A0A1B0GUL6 1792 aa5.78□□□□□ -1.48
ATXN3-220ENST00000553491 KIF16BQ96L93 1317 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 SCN9AQ15858 1988 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 BLACEA4D250 179 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 GLTPD2A6NH11 291 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 PPP1R11O60927 126 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 VEGFAP15692 232 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 KCNJ6P48051 423 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 LINC00310P59036 64 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 SRSF3P84103 164 aaKnown RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 SCRN1Q12765 414 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 MAP4K2Q12851 820 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 PABPC4Q13310 644 aaKnown RBP eCLIP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 NTRK3Q16288 839 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 SLC35F1Q5T1Q4 408 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 DENND5AQ6IQ26 1287 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 ATF7IPQ6VMQ6 1270 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 LCNL1Q6ZST4 164 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 LRRC56Q8IYG6 542 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 NAT16Q8N8M0 369 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 KREMEN2Q8NCW0 462 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 KCTD13Q8WZ19 329 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 COPS5Q92905 334 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 PSMD1Q99460 953 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 ANKRD2Q9GZV1 360 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 SIL1Q9H173 461 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 BICC1Q9H694 974 aaKnown RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 POLLQ9UGP5 575 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 HDAC5Q9UQL6 1122 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 LRRFIP2Q9Y608 721 aaKnown RBP5.77□□□□□ -1.49
ATXN3-220ENST00000553491 COL4A1P02462 1669 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 ADAMTS20P59510 1910 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 TRPM7Q96QT4 1865 aa5.77□□□□□ -1.49
ATXN3-220ENST00000553491 TCAF2A6NFQ2 919 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 C2orf71A6NGG8 1288 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 PLD2O14939 933 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 FRAT2O75474 233 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-220ENST00000553491 RFPL3O75679 317 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 CPP00450 1065 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 MPOP05164 745 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 THBDP07204 575 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms