RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	SYT2	Q8N9I0	419 aa	Predicted RBP	11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MCPH1	Q8NEM0	835 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TCP11	Q8WWU5	503 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TOP1MT	Q969P6	601 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	EPSTI1	Q96J88	318 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CLIC6	Q96NY7	704 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TRAIP	Q9BWF2	469 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FTHL17	Q9BXU8	183 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RGS18	Q9NS28	235 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ADGRA3	Q8IWK6	1321 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	LCHN	A4D1U4	455 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ARHGEF35	A5YM69	484 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GPR182	O15218	404 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ASAP2	O43150	1006 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CSDE1	O75534	798 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RPS6KA5	O75582	802 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ATF7	P17544	494 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PLCG1	P19174	1290 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GUCY2C	P25092	1073 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	HOXA11	P31270	313 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DNM2	P50570	870 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CEBPZ	Q03701	1054 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DNM1	Q05193	864 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MBTD1	Q05BQ5	628 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MXD4	Q14582	209 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KARS	Q15046	597 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ARSH	Q5FYA8	562 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RINT1	Q6NUQ1	792 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SHC4	Q6S5L8	630 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SRGAP1	Q7Z6B7	1085 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KRI1	Q8N9T8	703 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SYMPK	Q92797	1274 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KCNN1	Q92952	543 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ZNF689	Q96CS4	500 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NLRP4	Q96MN2	994 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ZNF396	Q96N95	335 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CCDC113	Q9H0I3	377 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NT5C3A	Q9H0P0	336 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PRDM6	Q9NQX0	595 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	AGPAT5	Q9NUQ2	364 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RNF19A	Q9NV58	838 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TFIP11	Q9UBB9	837 aa	Known RBP	11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RCOR1	Q9UKL0	485 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GINS2	Q9Y248	185 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	STXBP5L	Q9Y2K9	1186 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KAT6A	Q92794	2004 aa		11.24	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SPTLC2	O15270	562 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	AMH	P03971	560 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	EDN1	P05305	212 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FGFR4	P22455	802 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KCNJ6	P48051	423 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RAB30	Q15771	203 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	E2F4	Q16254	413 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SPECC1	Q5M775	1068 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	UBXN11	Q5T124	520 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PPP4R3CP	Q6ZMV5	832 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154		Q7L0L9	218 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SPRED2	Q7Z698	418 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ZNF598	Q86UK7	904 aa	Known RBP	11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DEFB123	Q8N688	67 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RNF149	Q8NC42	400 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NLRP7	Q8WX94	980 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DNM3	Q9UQ16	869 aa		11.23	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TSPAN1	O60635	241 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DGKI	O75912	1065 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CA3	P07451	260 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PLA2G4B	P0C869	781 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	UBA7	P41226	1012 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NAMPT	P43490	491 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SARS	P49591	514 aa	Known RBP	11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ZNF131	P52739	623 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TAP1	Q03518	808 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NFX1	Q12986	1120 aa	Known RBP	11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FAM187B	Q17R55	369 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ODR4	Q5SWX8	454 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SLC24A5	Q71RS6	500 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NPAS4	Q8IUM7	802 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GBF1	Q92538	1859 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RAD54L	Q92698	747 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	EVPL	Q92817	2033 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TIFA	Q96CG3	184 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GUCD1	Q96NT3	240 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FIZ1	Q96SL8	496 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PLIN2	Q99541	437 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RAD9A	Q99638	391 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ADAM2	Q99965	735 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TIPIN	Q9BVW5	301 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NKX2-4	Q9H2Z4	354 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FZD8	Q9H461	694 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ELAC1	Q9H777	363 aa	Known RBP	11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CHST12	Q9NRB3	414 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	C1orf112	Q9NSG2	853 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KCND2	Q9NZV8	630 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CHD7	Q9P2D1	2997 aa		11.22	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	STK17A	Q9UEE5	414 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms