RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PYGBP11216 843 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 SRFP11831 508 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 SDHBP21912 280 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 WTAPQ15007 396 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 ST3GAL2Q16842 350 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 CMASQ8NFW8 434 aaPredicted RBP12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 IGDCC4Q8TDY8 1250 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 NXPE3Q969Y0 559 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 PPP1R16BQ96T49 567 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 SDF4Q9BRK5 362 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 MRPL9Q9BYD2 267 aaKnown RBP12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 IL25Q9H293 177 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 PATJQ8NI35 1801 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 MEIS1O00470 390 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 GALTP07902 379 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 TGM1P22735 817 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 EIF4BP23588 611 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 CLCN4P51793 760 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 ANTXR2P58335 489 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 KIAA0319Q5VV43 1072 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 GPR161Q8N6U8 529 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
SUPT16H-202ENST00000552829 CARNS1A5YM72 827 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 SPDYE3A6NKU9 549 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 HIP1O00291 1037 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 CA8P35219 290 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 TRDNQ13061 729 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 HDAC1Q13547 482 aaPredicted RBP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 CEP55Q53EZ4 464 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 FAM160B1Q5W0V3 765 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 CYP26C1Q6V0L0 522 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 PLEKHM2Q8IWE5 1019 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 RSPH1Q8WYR4 309 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 MYADMQ96S97 322 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 LZTS2Q9BRK4 669 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 SLC2A4RGQ9NR83 387 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 SEC63Q9UGP8 760 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
SUPT16H-202ENST00000552829 ERICH2A1L162 156 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 BACH1O14867 736 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 KINO60870 393 aaKnown RBP12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 ADRB1P08588 477 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 CYP21A2P08686 494 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 CLCN3P51790 818 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 STARD6P59095 220 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 SPECC1Q5M775 1068 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 PJA1Q8NG27 643 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 GPR152Q8TDT2 470 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 NELL1Q92832 810 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 ZNF302Q9NR11 478 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 ARHGEF3Q9NR81 526 aa12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
SUPT16H-202ENST00000552829 MYH15Q9Y2K3 1946 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 PRR5-ARHGAP8B1AHC4 643 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 ANHXE9PGG2 379 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 SPTLC1O15269 473 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 MAGEB2O15479 319 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 B4GALT3O60512 393 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 DDAH1O94760 285 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 DARSP14868 501 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 KIF5BP33176 963 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 ARHGAP8P85298 464 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 SWSAP1Q6NVH7 229 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 NIPA1Q7RTP0 329 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 TEX2Q8IWB9 1127 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 RTKNQ9BST9 563 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 FOXQ1Q9C009 403 aa12.9□□□□□ -0.34
SUPT16H-202ENST00000552829 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms