RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 TMPRSS15P98073 1019 aa8.5□□□□□ -1.05
CHPT1-209ENST00000552329 NFKB2Q00653 900 aa8.5□□□□□ -1.05
CHPT1-209ENST00000552329 SLFN13Q68D06 897 aa8.5□□□□□ -1.05
CHPT1-209ENST00000552329 ESPNLQ6ZVH7 1005 aa8.5□□□□□ -1.05
CHPT1-209ENST00000552329 TAX1BP1Q86VP1 789 aa8.5□□□□□ -1.05
CHPT1-209ENST00000552329 GIMAP8Q8ND71 665 aaPredicted RBP8.5□□□□□ -1.05
CHPT1-209ENST00000552329 OR10A2Q9H208 303 aa8.5□□□□□ -1.05
CHPT1-209ENST00000552329 RBM8AQ9Y5S9 174 aaKnown RBP8.5□□□□□ -1.05
CHPT1-209ENST00000552329 ARHGAP6O43182 974 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 CDC14BO60729 498 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 BCAR1P56945 870 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 ATP2C1P98194 919 aaPredicted RBP8.49□□□□□ -1.05
CHPT1-209ENST00000552329 STAT4Q14765 748 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 CCDC62Q6P9F0 684 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 KANSL1Q7Z3B3 1105 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 CIR1Q86X95 450 aaPredicted RBP8.49□□□□□ -1.05
CHPT1-209ENST00000552329 AFAP1L2Q8N4X5 818 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 CLRN3Q8NCR9 226 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 NOL10Q9BSC4 688 aaKnown RBP8.49□□□□□ -1.05
CHPT1-209ENST00000552329 RIMBP3CA6NJZ7 1639 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 RIMBP3BA6NNM3 1639 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 RIMBP3Q9UFD9 1639 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 TTBK1Q5TCY1 1321 aaPredicted RBP8.49□□□□□ -1.05
CHPT1-209ENST00000552329 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
CHPT1-209ENST00000552329 ADAMTS12P58397 1594 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 FHAD1B1AJZ9 1412 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 PRSS38A1L453 326 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 MATN2O00339 956 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 OPHN1O60890 802 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 PHC1P78364 1004 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 PRRT2Q7Z6L0 340 aaPredicted RBP8.48□□□□□ -1.05
CHPT1-209ENST00000552329 CMIPQ8IY22 773 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 SSBP3Q9BWW4 388 aaPredicted RBP8.48□□□□□ -1.05
CHPT1-209ENST00000552329 VTA1Q9NP79 307 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 TOPORSQ9NS56 1045 aaPredicted RBP8.48□□□□□ -1.05
CHPT1-209ENST00000552329 POLR3BQ9NW08 1133 aaPredicted RBP8.48□□□□□ -1.05
CHPT1-209ENST00000552329 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
CHPT1-209ENST00000552329 OAZ3Q9UMX2 235 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 EDARQ9UNE0 448 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 ERICH3Q5RHP9 1530 aa8.48□□□□□ -1.05
CHPT1-209ENST00000552329 GRIN2AQ12879 1464 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 PRRG2O14669 202 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 ICAM4Q14773 271 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 KLHDC10Q6PID8 442 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 FRMD7Q6ZUT3 714 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 CXorf67Q86X51 503 aaPredicted RBP8.47□□□□□ -1.05
CHPT1-209ENST00000552329 ATL2Q8NHH9 583 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 RPL10LQ96L21 214 aaKnown RBP8.47□□□□□ -1.05
CHPT1-209ENST00000552329 WDR92Q96MX6 357 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 OR14A2Q96R54 314 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 PPP2R3BQ9Y5P8 575 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 ARHGEF11O15085 1522 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 MYPNQ86TC9 1320 aa8.47□□□□□ -1.05
CHPT1-209ENST00000552329 C2orf78A6NCI8 922 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 ZEB2O60315 1214 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 CR2P20023 1033 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 PDCD1Q15116 288 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 CT83Q5H943 113 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 GPR158Q5T848 1215 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 TCTN3Q6NUS6 607 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 CHST13Q8NET6 341 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 COG1Q8WTW3 980 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 GCDHQ92947 438 aaPredicted RBP8.46□□□□□ -1.06
CHPT1-209ENST00000552329 TMEM176AQ96HP8 235 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 SMPD4Q9NXE4 827 aa8.46□□□□□ -1.06
CHPT1-209ENST00000552329 APOBEC2Q9Y235 224 aaKnown RBP8.46□□□□□ -1.06
CHPT1-209ENST00000552329 A0A0A6YYJ9 748 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.45□□□□□ -1.06
CHPT1-209ENST00000552329 FOXS1O43638 330 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 DNAJC6O75061 913 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 H2AFYO75367 372 aaKnown RBP8.45□□□□□ -1.06
CHPT1-209ENST00000552329 LPLP06858 475 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 VIL1P09327 827 aaKnown RBP8.45□□□□□ -1.06
CHPT1-209ENST00000552329 IQSEC1Q6DN90 963 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 ZNF585AQ6P3V2 769 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 BMP8AQ7Z5Y6 402 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 RASSF3Q86WH2 238 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 TGFBRAP1Q8WUH2 860 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 CFHR4Q92496 578 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 PITHD1Q9GZP4 211 aaPredicted RBP8.45□□□□□ -1.06
CHPT1-209ENST00000552329 SEC61A2Q9H9S3 476 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 SPC25Q9HBM1 224 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 USP36Q9P275 1121 aaKnown RBP8.45□□□□□ -1.06
CHPT1-209ENST00000552329 SYNPO2Q9UMS6 1093 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 PRKAB1Q9Y478 270 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 NCANO14594 1321 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 CARMIL1Q5VZK9 1371 aa8.45□□□□□ -1.06
CHPT1-209ENST00000552329 A0A0A6YYK5 440 aaPredicted RBP8.44□□□□□ -1.06
CHPT1-209ENST00000552329 GOLGA8BA8MQT2 603 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
CHPT1-209ENST00000552329 TCIRG1Q13488 830 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 ANKRD53Q8N9V6 530 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 NKD2Q969F2 451 aaPredicted RBP8.44□□□□□ -1.06
CHPT1-209ENST00000552329 SOX7Q9BT81 388 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms