RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 RIF1Q5UIP0 2472 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-210ENST00000551981 PTPRZ1P23471 2315 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 HMGB1P09429 215 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 FOXK2Q01167 660 aa16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 PRKCEQ02156 737 aa16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 KIAA1841Q6NSI8 718 aa16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 ZDHHC14Q8IZN3 488 aa16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 ZNF668Q96K58 619 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 GCOM2Q9BZD3 368 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 CHST12Q9NRB3 414 aa16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
CHMP1A-210ENST00000551981 NT5C1B-RDH14C9J2C7 533 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■■■ 37.4
CHMP1A-210ENST00000551981 SKIP12755 728 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
CHMP1A-210ENST00000551981 SFNP31947 248 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 CIITAP33076 1130 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 ADD1P35611 737 aaKnown RBP16■□□□□ 0.15
CHMP1A-210ENST00000551981 JAK3P52333 1124 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 POLGP54098 1239 aaPredicted RBP16■□□□□ 0.15
CHMP1A-210ENST00000551981 ASTLQ6HA08 431 aaPredicted RBP16■□□□□ 0.15
CHMP1A-210ENST00000551981 VPS52Q8N1B4 723 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 TMEM105Q8N8V8 129 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 ZBP1Q9H171 429 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 VPS13AQ96RL7 3174 aa16■□□□□ 0.15
CHMP1A-210ENST00000551981 WDR87Q6ZQQ6 2873 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 CHMP2AO43633 222 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 ZNF862O60290 1169 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 GAS7O60861 476 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 ASGR2P07307 311 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 WEE2P0C1S8 567 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 FGFR4P22455 802 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 NBL1P41271 181 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 PHKA2P46019 1235 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 DNM2P50570 870 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 AKAP17AQ02040 695 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 TSGA10IPQ3SY00 556 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 GLB1LQ6UWU2 654 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 DDX53Q86TM3 631 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 PPFIBP1Q86W92 1011 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 C12orf76Q8N812 135 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 CCDC148Q8NFR7 591 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 LENG9Q96B70 501 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 ACSF2Q96CM8 615 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 RIT2Q99578 217 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 STK39Q9UEW8 545 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 LIMD1Q9UGP4 676 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 IRAK3Q9Y616 596 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 FAM186AA6NE01 2351 aa15.99■□□□□ 0.15
CHMP1A-210ENST00000551981 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 MSH4O15457 936 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 PRPF3O43395 683 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 CTSAP10619 480 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 EPCAMP16422 314 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 CLCN5P51795 746 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 RNASELQ05823 741 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 ADCK5Q3MIX3 580 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 TWF2Q6IBS0 349 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 DENND4AQ7Z401 1863 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 CABP7Q86V35 215 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 AUTS2Q8WXX7 1259 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 IGSF21Q96ID5 467 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 TRAIPQ9BWF2 469 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 TEKT3Q9BXF9 490 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 INO80BQ9C086 356 aaPredicted RBP15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 SMOC2Q9H3U7 446 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
CHMP1A-210ENST00000551981 PRR23AA6NEV1 266 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 CSDE1O75534 798 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 RAB27AP51159 221 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 USP11P51784 963 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 UGCGQ16739 394 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 ASCL5Q7RTU5 278 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 RDM1Q8NG50 284 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 PIN4Q9Y237 131 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-210ENST00000551981 TARBP2Q15633 366 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 MTERF2Q49AM1 385 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 XKR3Q5GH77 459 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 BMP2KLQ5H9B9 411 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 NOMO2Q5JPE7 1267 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 TMC5Q6UXY8 1006 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 CCDC149Q6ZUS6 474 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 OTOP3Q7RTS5 596 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 ZNF410Q86VK4 478 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 TMEM173Q86WV6 379 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 FLCNQ8NFG4 579 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 SLC22A17Q8WUG5 538 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 NKD2Q969F2 451 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 EMILIN2Q9BXX0 1053 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 NIFKQ9BYG3 293 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 UNC45AQ9H3U1 944 aa15.96■□□□□ 0.15
CHMP1A-210ENST00000551981 TBC1D13Q9NVG8 400 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms