RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 FAM109BQ6ICB4 259 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 FAM228AQ86W67 206 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 ZNF710Q8N1W2 664 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 RNF149Q8NC42 400 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 MINDY3Q9H8M7 445 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 GRXCR1A8MXD5 290 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 ENPP3O14638 875 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 HIP1RO75146 1068 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 MAPK7Q13164 816 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 PAK2Q13177 524 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 CAPSQ13938 189 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 MXD4Q14582 209 aaPredicted RBP16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 RESP18Q5W5W9 173 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 ADALQ6DHV7 355 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 TMCO2Q7Z6W1 182 aaPredicted RBP16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 ZNF410Q86VK4 478 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 DAW1Q8N136 415 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
SMARCD1-211ENST00000551497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 GPR182O15218 404 aa16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 MGEA5O60502 916 aa16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 STAT6P42226 847 aa16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 FXR1P51114 621 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 DEFB103AP81534 67 aa16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 APBB2Q92870 758 aa16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 STK17AQ9UEE5 414 aa16.8■□□□□ 0.28
SMARCD1-211ENST00000551497 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 A0A1B0GVL5 298 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 A0A1W2PPC1 479 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 POLR2DO15514 142 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 BAIAP3O94812 1187 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 CMA1P23946 247 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 PTENP60484 403 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 WDR5P61964 334 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 TFDP1Q14186 410 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 E2F4Q16254 413 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 LINC01599Q8WXQ3 324 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 STAMQ92783 540 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 DHX58Q96C10 678 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
SMARCD1-211ENST00000551497 MYMKA6NI61 221 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 LRRIQ4A6NIV6 560 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 PHKA2P46019 1235 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 POU5F1BQ06416 359 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 GIT2Q14161 759 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 DSC3Q14574 896 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 KIFAP3Q92845 792 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 ADAM2Q99965 735 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 KIFC3Q9BVG8 833 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 MTIF3Q9H2K0 278 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
SMARCD1-211ENST00000551497 INO80B-WBP1J3KQ70 363 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 SOX1O00570 391 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 KCNJ6P48051 423 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 RABGGTBP53611 331 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 PEX3P56589 373 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 ODR4Q5SWX8 454 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 FAM117BQ6P1L5 589 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 CATSPER4Q7RTX7 472 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 IFT74Q96LB3 600 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 INO80BQ9C086 356 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 KCND2Q9NZV8 630 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 USP20Q9Y2K6 914 aa16.77■□□□□ 0.28
SMARCD1-211ENST00000551497 MICAL3Q7RTP6 2002 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 CCDC169A6NNP5 214 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 EFCAB14O75071 495 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 UPP2O95045 317 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 PFKFB1P16118 471 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 IBSPP21815 317 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 PBX2P40425 430 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 NAMPTP43490 491 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 NPTX2P47972 431 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 MBTD1Q05BQ5 628 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 DEPTORQ8TB45 409 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 DRC1Q96MC2 740 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 TIPINQ9BVW5 301 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 FTHL17Q9BXU8 183 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
SMARCD1-211ENST00000551497 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms