RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 KIF5BP33176 963 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
PTCH1-222ENST00000551425 STARD6P59095 220 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
PTCH1-222ENST00000551425 CEP55Q53EZ4 464 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 DCLRE1AQ6PJP8 1040 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 METTL13Q8N6R0 699 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
PTCH1-222ENST00000551425 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 ZNF302Q9NR11 478 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 DACT1Q9NYF0 836 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 CLUHO75153 1309 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 DCDC2BA2VCK2 349 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 MEIS1O00470 390 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 LILRB3O75022 631 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 CNPP09543 421 aaKnown RBP13.56□□□□□ -0.24
PTCH1-222ENST00000551425 TGM1P22735 817 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 LINC01465Q8N7H1 131 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 CTCFLQ8NI51 663 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-222ENST00000551425 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-222ENST00000551425 SHDQ96IW2 340 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 MYADMQ96S97 322 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 TRAIPQ9BWF2 469 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 FOXQ1Q9C009 403 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 EPC1Q9H2F5 836 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 NRDE2Q9H7Z3 1164 aa13.56□□□□□ -0.24
PTCH1-222ENST00000551425 CCDC195A0A1B0GUA6 201 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 ANHXE9PGG2 379 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 MAGEB2O15479 319 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 DDAH1O94760 285 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 PAPLNO95428 1278 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 DARSP14868 501 aaKnown RBP13.55□□□□□ -0.24
PTCH1-222ENST00000551425 GNAQP50148 359 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 CLCN3P51790 818 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 MIS18BP1Q6P0N0 1132 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 SRBD1Q8N5C6 995 aaKnown RBP13.55□□□□□ -0.24
PTCH1-222ENST00000551425 ZBTB44Q8NCP5 570 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 IGDCC4Q8TDY8 1250 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 ATRIPQ8WXE1 791 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 MAP7D2Q96T17 732 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 MAN1C1Q9NR34 630 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 TBC1D13Q9NVG8 400 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTCH1-222ENST00000551425 DPP7Q9UHL4 492 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 SMG5Q9UPR3 1016 aaKnown RBP13.55□□□□□ -0.24
PTCH1-222ENST00000551425 AKT3Q9Y243 479 aa13.55□□□□□ -0.24
PTCH1-222ENST00000551425 MAFBQ9Y5Q3 323 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-222ENST00000551425 LAMTOR5O43504 91 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 LILRB5O75023 590 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 LRRN2O75325 713 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 LAMP2P13473 410 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 TMOD1P28289 359 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 PHKA2P46019 1235 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 SLC11A1P49279 550 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 HTR4Q13639 388 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 ELMSAN1Q6PJG2 1045 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
PTCH1-222ENST00000551425 CKAP2LQ8IYA6 745 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 NELL1Q92832 810 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 CHAMP1Q96JM3 812 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
PTCH1-222ENST00000551425 BCO2Q9BYV7 579 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 OSBPL3Q9H4L5 887 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 MRPL17Q9NRX2 175 aaKnown RBP13.54□□□□□ -0.24
PTCH1-222ENST00000551425 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-222ENST00000551425 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-222ENST00000551425 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 CACNA1IQ9P0X4 2223 aa13.54□□□□□ -0.24
PTCH1-222ENST00000551425 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
PTCH1-222ENST00000551425 INPPL1O15357 1258 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 DHX15O43143 795 aaKnown RBP13.53□□□□□ -0.24
PTCH1-222ENST00000551425 CYP21A2P08686 494 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 SKIP12755 728 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 GPC3P51654 580 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-222ENST00000551425 EFCAB12Q6NXP0 572 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 GLB1LQ6UWU2 654 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 ZNF654Q8IZM8 581 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 OSBPL6Q9BZF3 934 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 LY9Q9HBG7 655 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 ZSCAN32Q9NX65 697 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 ATRXP46100 2492 aa13.53□□□□□ -0.24
PTCH1-222ENST00000551425 EVPLQ92817 2033 aa13.52□□□□□ -0.24
PTCH1-222ENST00000551425 KANSL1LA0AUZ9 987 aa13.52□□□□□ -0.25
PTCH1-222ENST00000551425 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
PTCH1-222ENST00000551425 FOSP01100 380 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-222ENST00000551425 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTCH1-222ENST00000551425 ADH1AP07327 375 aa13.52□□□□□ -0.25
PTCH1-222ENST00000551425 FGFR4P22455 802 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms