RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 NUDT10Q8NFP7 164 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 STAG1Q8WVM7 1258 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 NUDT11Q96G61 164 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 CDK5RAP1Q96SZ6 601 aaKnown RBP4.76□□□□□ -1.65
SCAF11-215ENST00000551391 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 TMEM168Q9H0V1 697 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 Q9UFV3 132 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 ADAM29Q9UKF5 820 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 TMPRSS11EQ9UL52 423 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 SPEF1Q9Y4P9 236 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 MYPNQ86TC9 1320 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 PRSS38A1L453 326 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 LCHNA4D1U4 455 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 TRIM75PA6NK02 468 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 GOLGA8AA7E2F4 631 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 GOLGA8BA8MQT2 603 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 OPHN1O60890 802 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 PFKMP08237 780 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 PDGFRBP09619 1106 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 TACR2P21452 398 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 ENPP1P22413 925 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 ETV4P43268 484 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 GPR15P49685 360 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 KLF1Q13351 362 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-215ENST00000551391 DGKDQ16760 1214 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 BRDTQ58F21 947 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-215ENST00000551391 CCDC178Q5BJE1 867 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 TRIM68Q6AZZ1 485 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 UNQ6494/PRO21346Q6UXR6 183 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 LIMS2Q7Z4I7 341 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 PLEKHH3Q7Z736 793 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 BCL6BQ8N143 479 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-215ENST00000551391 CBARPQ8N350 705 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-215ENST00000551391 FERMT2Q96AC1 680 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 MBD6Q96DN6 1003 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 LCORQ96JN0 433 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-215ENST00000551391 MRIQ9BWK5 157 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 ANO3Q9BYT9 981 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 MTG2Q9H4K7 406 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 BARX1Q9HBU1 254 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-215ENST00000551391 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 VWA7Q9Y334 891 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 PPP2R3BQ9Y5P8 575 aa4.75□□□□□ -1.65
SCAF11-215ENST00000551391 WASHC2AQ641Q2 1341 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 ST20-MTHFSA0A0A6YYL1 179 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 LAMTOR5O43504 91 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 KATNA1O75449 491 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 APOL3O95236 402 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 CYP1A1P04798 512 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-215ENST00000551391 GPR3P46089 330 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 SCAND1P57086 179 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 KRT85P78386 507 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 ITKQ08881 620 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 FAM50AQ14320 339 aaKnown RBP4.74□□□□□ -1.65
SCAF11-215ENST00000551391 OTOP2Q7RTS6 562 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 SPRED1Q7Z699 444 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 LYSMD2Q8IV50 215 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 SLC41A1Q8IVJ1 513 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 IFNL2Q8IZJ0 200 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 PPP1R14CQ8TAE6 165 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 RAX2Q96IS3 184 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 CARD11Q9BXL7 1154 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 ASPSCR1Q9BZE9 553 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 TRHDEQ9UKU6 1024 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 SYNPO2Q9UMS6 1093 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 TSC22D4Q9Y3Q8 395 aa4.74□□□□□ -1.65
SCAF11-215ENST00000551391 NPEPPSL1A6NEC2 478 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 OVOL3O00110 214 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 CYR61O00622 381 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 GABRDO14764 452 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 CFBP00751 764 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 MTHFD2P13995 350 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 SESN2P58004 480 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-215ENST00000551391 ANTXR2P58335 489 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 MRPS9P82933 396 aaKnown RBP4.73□□□□□ -1.65
SCAF11-215ENST00000551391 UGT8Q16880 541 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 PITRM1Q5JRX3 1037 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 ZFPM1Q8IX07 1006 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 CMIPQ8IY22 773 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 CDYL2Q8N8U2 506 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 SSH1Q8WYL5 1049 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 OSBPL6Q9BZF3 934 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 SCAND2PQ9GZW5 306 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-215ENST00000551391 CCDC8Q9H0W5 538 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-215ENST00000551391 DEF6Q9H4E7 631 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 JADE2Q9NQC1 790 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 SAE1Q9UBE0 346 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-215ENST00000551391 PRSS50Q9UI38 385 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 PCDHB6Q9Y5E3 794 aa4.73□□□□□ -1.65
SCAF11-215ENST00000551391 PPM1GO15355 546 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-215ENST00000551391 FZD7O75084 574 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 HMGCRP04035 888 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 CLEC2LP0C7M8 214 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 RBP3P10745 1247 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 CSF2RBP32927 897 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 ADCY8P40145 1251 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 MAN2A1Q16706 1144 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 CT83Q5H943 113 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 CCDC62Q6P9F0 684 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms