RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
PFDN5-213ENST00000550964 TRAIPQ9BWF2 469 aa11.12□□□□□ -0.63
PFDN5-213ENST00000550964 BHMT2Q9H2M3 363 aa11.12□□□□□ -0.63
PFDN5-213ENST00000550964 CUEDC2Q9H467 287 aa11.12□□□□□ -0.63
PFDN5-213ENST00000550964 ERVK-5Q9HDB9 667 aa11.12□□□□□ -0.63
PFDN5-213ENST00000550964 CXXC1Q9P0U4 656 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-213ENST00000550964 LARSQ9P2J5 1176 aaKnown RBP11.12□□□□□ -0.63
PFDN5-213ENST00000550964 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-213ENST00000550964 NOC2LQ9Y3T9 749 aaKnown RBP11.12□□□□□ -0.63
PFDN5-213ENST00000550964 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
PFDN5-213ENST00000550964 COL4A6Q14031 1691 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 A0A087WZ62 844 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 USO1O60763 962 aaKnown RBP11.11□□□□□ -0.63
PFDN5-213ENST00000550964 CUTAO60888 179 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 BRD1O95696 1058 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 SRGAP2CP0DJJ0 459 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 GUCY2CP25092 1073 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 ARL2P36404 184 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 SARSP49591 514 aaKnown RBP11.11□□□□□ -0.63
PFDN5-213ENST00000550964 PTENP60484 403 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 AMPD3Q01432 767 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 PTPAQ15257 358 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 ZRSR1Q15695 479 aaKnown RBP11.11□□□□□ -0.63
PFDN5-213ENST00000550964 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 FAM102BQ5T8I3 360 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 ABI1Q8IZP0 508 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 SYT2Q8N9I0 419 aaPredicted RBP11.11□□□□□ -0.63
PFDN5-213ENST00000550964 RNF149Q8NC42 400 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 LINC00301Q8NCQ3 95 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 TMEM143Q96AN5 459 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 NLRP4Q96MN2 994 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 USP28Q96RU2 1077 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 YME1L1Q96TA2 773 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 FDXACB1Q9BRP7 624 aaPredicted RBP11.11□□□□□ -0.63
PFDN5-213ENST00000550964 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 MAGEF1Q9HAY2 307 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 UBN1Q9NPG3 1134 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 PRMT7Q9NVM4 692 aaPredicted RBP11.11□□□□□ -0.63
PFDN5-213ENST00000550964 TMEM161AQ9NX61 479 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 CLIC4Q9Y696 253 aa11.11□□□□□ -0.63
PFDN5-213ENST00000550964 NLRC5Q86WI3 1866 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 PTPRSQ13332 1948 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 KRT18P05783 430 aaKnown RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 DDIT3P35638 169 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 HTRA4P83105 476 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 DMP1Q13316 513 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 MAPK6Q16659 721 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 RRAGBQ5VZM2 374 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 NOTUMQ6P988 496 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 FAM228AQ86W67 206 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 DEPTORQ8TB45 409 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 ADAM2Q99965 735 aa11.1□□□□□ -0.63
PFDN5-213ENST00000550964 POLR3FQ9H1D9 316 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 AGO3Q9H9G7 860 aaKnown RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 FBXO2Q9UK22 296 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
PFDN5-213ENST00000550964 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 TMEM150BA6NC51 233 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 LRRIQ4A6NIV6 560 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 INO80B-WBP1J3KQ70 363 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 ZBTB39O15060 712 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 ZNF623O75123 536 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 MARCKSP29966 332 aaPredicted RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 ME1P48163 572 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 FAM189BP81408 668 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 IL17AQ16552 155 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 FAM187BQ17R55 369 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 TWF2Q6IBS0 349 aaKnown RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 SV2BQ7L1I2 683 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 FIBCD1Q8N539 461 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 IQUBQ8NA54 791 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 LARP4BQ92615 738 aaKnown RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 TGS1Q96RS0 853 aaKnown RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 SH2D3AQ9BRG2 576 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 ADPGKQ9BRR6 497 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 MMTAG2Q9BU76 263 aaKnown RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 MRPL9Q9BYD2 267 aaKnown RBP11.09□□□□□ -0.63
PFDN5-213ENST00000550964 CSRNP2Q9H175 543 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 ZNF576Q9H609 170 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 IFT122Q9HBG6 1241 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 XPNPEP1Q9NQW7 623 aa11.09□□□□□ -0.63
PFDN5-213ENST00000550964 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms