RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 CES2O00748 559 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 CBX6O95503 412 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 GNA14O95837 355 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 CALB2P22676 271 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 MRPS35P82673 323 aaKnown RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 DNAJC3Q13217 504 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 FGD4Q96M96 766 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 LRRC27Q9C0I9 530 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 A6NHS1 94 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 ALADP13716 330 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 PRDX5P30044 214 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 PTDSS1P48651 473 aaKnown RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 ROR2Q01974 943 aaKnown RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 MECOMQ03112 1051 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 UBE2SQ16763 222 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 RASIP1Q5U651 963 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 SPIRE2Q8WWL2 714 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 SCOCQ9UIL1 159 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
VDR-208ENST00000550325 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 PKD1L3Q7Z443 1732 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 ECM1Q16610 540 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 DCAF12L1Q5VU92 463 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 ZDHHC24Q6UX98 284 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 ECHDC2Q86YB7 292 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 LRRC37BQ96QE4 947 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 NT5C3AQ9H0P0 336 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 KCNMB3Q9NPA1 279 aa13.04□□□□□ -0.32
VDR-208ENST00000550325 AJAP1Q9UKB5 411 aaPredicted RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
VDR-208ENST00000550325 ANKRD63C9JTQ0 380 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 MEIS1O00470 390 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 THAP12O43422 761 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 PON1P27169 355 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 KYNUQ16719 465 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 LRRC23Q53EV4 343 aaPredicted RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 SEL1L2Q5TEA6 688 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 ALG3Q92685 438 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 GBP5Q96PP8 586 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 CHD4Q14839 1912 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 ALDH3A1P30838 453 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 PEX5P50542 639 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 TMED2Q15363 201 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 LRRC8CQ8TDW0 803 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 ARHGEF26Q96DR7 871 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 USH1CQ9Y6N9 552 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 ABCB11O95342 1321 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 IGSF9BQ9UPX0 1349 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 UNC5CO95185 931 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 RTN3O95197 1032 aaPredicted RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 UBTFL6P0CB48 400 aaPredicted RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 CTTNQ14247 550 aaKnown RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 PDCD2Q16342 344 aaPredicted RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 HP1BP3Q5SSJ5 553 aaPredicted RBP13.03□□□□□ -0.32
VDR-208ENST00000550325 RDH13Q8NBN7 331 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 TMEM47Q9BQJ4 181 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 MYH4Q9Y623 1939 aa13.03□□□□□ -0.32
VDR-208ENST00000550325 POTEB3A0JP26 581 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 FAM187AA6NFU0 413 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 POTECB2RU33 542 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 SPOPO43791 374 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 SERPINB4P48594 390 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 GRM4Q14833 912 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 RBM26Q5T8P6 1007 aaKnown RBP13.02□□□□□ -0.32
VDR-208ENST00000550325 CYP4F22Q6NT55 531 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 POTEBQ6S5H4 581 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 SPOCK2Q92563 424 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 KRT35Q92764 455 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 EZH1Q92800 747 aaPredicted RBP13.02□□□□□ -0.32
VDR-208ENST00000550325 HES6Q96HZ4 224 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 CEP63Q96MT8 703 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 DDX50Q9BQ39 737 aaKnown RBP13.02□□□□□ -0.32
VDR-208ENST00000550325 CDC42EP4Q9H3Q1 356 aaKnown RBP13.02□□□□□ -0.32
VDR-208ENST00000550325 USP40Q9NVE5 1235 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.32
VDR-208ENST00000550325 PFASO15067 1338 aa13.02□□□□□ -0.32
VDR-208ENST00000550325 BAZ2AQ9UIF9 1905 aaKnown RBP13.02□□□□□ -0.32
VDR-208ENST00000550325 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 CUL3Q13618 768 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 UBL4BQ8N7F7 174 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 FAM13CQ8NE31 585 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 C1orf54Q8WWF1 131 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 KIAA1683Q9H0B3 1180 aa13.02□□□□□ -0.33
VDR-208ENST00000550325 WDR91A4D1P6 747 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms