RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 POP1Q99575 1024 aaKnown RBP15.04■□□□□ -0
NUP188-211ENST00000550219 TMEM117Q9H0C3 514 aa15.04■□□□□ -0
NUP188-211ENST00000550219 CWH43Q9H720 699 aa15.04■□□□□ -0
NUP188-211ENST00000550219 ELAC1Q9H777 363 aaKnown RBP15.04■□□□□ -0
NUP188-211ENST00000550219 TLE6Q9H808 572 aa15.04■□□□□ -0
NUP188-211ENST00000550219 WDR81Q562E7 1941 aa15.04■□□□□ -0
NUP188-211ENST00000550219 NCOR1O75376 2440 aa15.03■□□□□ -0
NUP188-211ENST00000550219 CCDC194A0A1B0GVG4 234 aa15.03■□□□□ -0
NUP188-211ENST00000550219 M0R2N6 131 aa15.03■□□□□ -0
NUP188-211ENST00000550219 HOXA2O43364 376 aa15.03■□□□□ -0
NUP188-211ENST00000550219 SLC37A4O43826 429 aa15.03■□□□□ -0
NUP188-211ENST00000550219 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
NUP188-211ENST00000550219 RBM10P98175 930 aaKnown RBP15.03■□□□□ -0
NUP188-211ENST00000550219 UBE3AQ05086 875 aa15.03■□□□□ -0
NUP188-211ENST00000550219 TRIM29Q14134 588 aa15.03■□□□□ -0
NUP188-211ENST00000550219 PLA2G4FQ68DD2 849 aa15.03■□□□□ -0
NUP188-211ENST00000550219 ECHDC2Q86YB7 292 aa15.03■□□□□ -0
NUP188-211ENST00000550219 RDM1Q8NG50 284 aa15.03■□□□□ -0
NUP188-211ENST00000550219 ETNPPLQ8TBG4 499 aa15.03■□□□□ -0
NUP188-211ENST00000550219 MSLNLQ96KJ4 702 aa15.03■□□□□ -0
NUP188-211ENST00000550219 ENTPD7Q9NQZ7 604 aa15.03■□□□□ -0
NUP188-211ENST00000550219 RNF19AQ9NV58 838 aa15.03■□□□□ -0
NUP188-211ENST00000550219 CLEC1BQ9P126 229 aa15.03■□□□□ -0
NUP188-211ENST00000550219 C19orf67A6NJJ6 358 aa15.02■□□□□ -0
NUP188-211ENST00000550219 DDX11L8A8MPP1 907 aa15.02■□□□□ -0
NUP188-211ENST00000550219 PRR33A8MZF0 331 aa15.02■□□□□ -0
NUP188-211ENST00000550219 STX6O43752 255 aa15.02■□□□□ -0
NUP188-211ENST00000550219 CA8P35219 290 aa15.02■□□□□ -0
NUP188-211ENST00000550219 ERVFC1P60507 584 aa15.02■□□□□ -0
NUP188-211ENST00000550219 FAM189BP81408 668 aa15.02■□□□□ -0
NUP188-211ENST00000550219 TARBP2Q15633 366 aaKnown RBP15.02■□□□□ -0
NUP188-211ENST00000550219 XKR3Q5GH77 459 aa15.02■□□□□ -0
NUP188-211ENST00000550219 FAM43BQ6ZT52 329 aaPredicted RBP15.02■□□□□ -0
NUP188-211ENST00000550219 HELQQ8TDG4 1101 aa15.02■□□□□ -0
NUP188-211ENST00000550219 NLRP4Q96MN2 994 aa15.02■□□□□ -0
NUP188-211ENST00000550219 ZNF558Q96NG5 402 aa15.02■□□□□ -0
NUP188-211ENST00000550219 CASD1Q96PB1 797 aa15.02■□□□□ -0
NUP188-211ENST00000550219 TCF25Q9BQ70 676 aa15.02■□□□□ -0
NUP188-211ENST00000550219 MUTYHQ9UIF7 546 aa15.02■□□□□ -0
NUP188-211ENST00000550219 MTMR6Q9Y217 621 aa15.02■□□□□ -0
NUP188-211ENST00000550219 MYO7AQ13402 2215 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 CYP3A7-CYP3A51PA0A087WV96 503 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 A0A087WZ62 844 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 CYP3A7P24462 503 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 FOSBP53539 338 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 GUCY1B3Q02153 619 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 LONRF3Q496Y0 759 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 CLLU1OSQ5K130 101 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 LLGL2Q6P1M3 1020 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 KCNT2Q6UVM3 1135 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 MOXD1Q6UVY6 613 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 LRRC55Q6ZSA7 311 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 RHPN2Q8IUC4 686 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 SMRP1Q8NCR6 262 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 VN1R2Q8NFZ6 395 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 MRPS27Q92552 414 aaKnown RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 MBOAT7Q96N66 472 aa15.01□□□□□ -0.01
NUP188-211ENST00000550219 FDXACB1Q9BRP7 624 aaPredicted RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 BMP2KQ9NSY1 1161 aaPredicted RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 PIN4Q9Y237 131 aaKnown RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 USP15Q9Y4E8 981 aaPredicted RBP15.01□□□□□ -0.01
NUP188-211ENST00000550219 H3BQV1 296 aa15□□□□□ -0.01
NUP188-211ENST00000550219 EML1O00423 815 aa15□□□□□ -0.01
NUP188-211ENST00000550219 MARCH6O60337 910 aa15□□□□□ -0.01
NUP188-211ENST00000550219 SFPQP23246 707 aaKnown RBP eCLIP15□□□□□ -0.01
NUP188-211ENST00000550219 U2AF2P26368 475 aaKnown RBP eCLIP15□□□□□ -0.01
NUP188-211ENST00000550219 KRT2P35908 639 aa15□□□□□ -0.01
NUP188-211ENST00000550219 DNM2P50570 870 aa15□□□□□ -0.01
NUP188-211ENST00000550219 PSMC5P62195 406 aa15□□□□□ -0.01
NUP188-211ENST00000550219 DUSP6Q16828 381 aa15□□□□□ -0.01
NUP188-211ENST00000550219 TWF2Q6IBS0 349 aaKnown RBP15□□□□□ -0.01
NUP188-211ENST00000550219 B3GNT9Q6UX72 402 aa15□□□□□ -0.01
NUP188-211ENST00000550219 PIK3AP1Q6ZUJ8 805 aa15□□□□□ -0.01
NUP188-211ENST00000550219 NEK8Q86SG6 692 aa15□□□□□ -0.01
NUP188-211ENST00000550219 KSR1Q8IVT5 923 aa15□□□□□ -0.01
NUP188-211ENST00000550219 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
NUP188-211ENST00000550219 ZNF710Q8N1W2 664 aa15□□□□□ -0.01
NUP188-211ENST00000550219 TNFRSF25Q93038 417 aa15□□□□□ -0.01
NUP188-211ENST00000550219 APOL5Q9BWW9 433 aa15□□□□□ -0.01
NUP188-211ENST00000550219 NIFKQ9BYG3 293 aaKnown RBP15□□□□□ -0.01
NUP188-211ENST00000550219 FOXP1Q9H334 677 aaPredicted RBP15□□□□□ -0.01
NUP188-211ENST00000550219 DACT1Q9NYF0 836 aa15□□□□□ -0.01
NUP188-211ENST00000550219 SUCLA2Q9P2R7 463 aaPredicted RBP15□□□□□ -0.01
NUP188-211ENST00000550219 PUF60Q9UHX1 559 aaKnown RBP15□□□□□ -0.01
NUP188-211ENST00000550219 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 FSCN2O14926 492 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 CCNT1O60563 726 aaKnown RBP14.99□□□□□ -0.01
NUP188-211ENST00000550219 STBD1O95210 358 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 EYA4O95677 639 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 BRD1O95696 1058 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 SRGAP2BP0DMP2 458 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 ATF7P17544 494 aaPredicted RBP14.99□□□□□ -0.01
NUP188-211ENST00000550219 PPM1AP35813 382 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 COASYQ13057 564 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 PKP1Q13835 747 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 SAFBQ15424 915 aaKnown RBP eCLIP14.99□□□□□ -0.01
NUP188-211ENST00000550219 NCAPH2Q6IBW4 605 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 ANO5Q75V66 913 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms