RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CALML4Q96GE6 196 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 MMTAG2Q9BU76 263 aaKnown RBP28.81■■■□□ 2.2
CPSF6-205ENST00000550075 IFT122Q9HBG6 1241 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 DACT1Q9NYF0 836 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 LCHNA4D1U4 455 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 CYP11B2P19099 503 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 ARL2P36404 184 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 POU5F1BQ06416 359 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 DSC3Q14574 896 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 GRIN2CQ14957 1233 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 PTPAQ15257 358 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 RASSF8Q8NHQ8 419 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 SP7Q8TDD2 431 aaPredicted RBP28.8■■■□□ 2.2
CPSF6-205ENST00000550075 CDX2Q99626 313 aaPredicted RBP28.8■■■□□ 2.2
CPSF6-205ENST00000550075 CHST12Q9NRB3 414 aa28.8■■■□□ 2.2
CPSF6-205ENST00000550075 MYO9BQ13459 2157 aa28.79■■■□□ 2.2
CPSF6-205ENST00000550075 ADGRA3Q8IWK6 1321 aa28.79■■■□□ 2.2
CPSF6-205ENST00000550075 CSDE1O75534 798 aaKnown RBP28.79■■■□□ 2.2
CPSF6-205ENST00000550075 FGFR4P22455 802 aa28.79■■■□□ 2.2
CPSF6-205ENST00000550075 CEBPZQ03701 1054 aaKnown RBP28.79■■■□□ 2.2
CPSF6-205ENST00000550075 PCBP1Q15365 356 aaKnown RBP eCLIP28.79■■■□□ 2.2
CPSF6-205ENST00000550075 FAM102BQ5T8I3 360 aa28.79■■■□□ 2.2
CPSF6-205ENST00000550075 USP28Q96RU2 1077 aa28.79■■■□□ 2.2
CPSF6-205ENST00000550075 GAS2L1Q99501 681 aaPredicted RBP28.79■■■□□ 2.2
CPSF6-205ENST00000550075 PCDHB7Q9Y5E2 793 aa28.79■■■□□ 2.2
CPSF6-205ENST00000550075 MORC2Q9Y6X9 1032 aaPredicted RBP28.79■■■□□ 2.2
CPSF6-205ENST00000550075 CHD9Q3L8U1 2897 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 LINC01553A4QN01 128 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 C9IYK1 514 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 E9PMD0 336 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 F13A1P00488 732 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 IBSPP21815 317 aaPredicted RBP28.78■■■□□ 2.2
CPSF6-205ENST00000550075 CAPSQ13938 189 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 MAEAQ7L5Y9 396 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 ASAP3Q8TDY4 903 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 TGS1Q96RS0 853 aaKnown RBP28.78■■■□□ 2.2
CPSF6-205ENST00000550075 PIN4Q9Y237 131 aaKnown RBP28.78■■■□□ 2.2
CPSF6-205ENST00000550075 STXBP5LQ9Y2K9 1186 aa28.78■■■□□ 2.2
CPSF6-205ENST00000550075 ERLIN2O94905 339 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 GLRA2P23416 452 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 PTENP60484 403 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 PPP2R5AQ15172 486 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 FOXD4L5Q5VV16 416 aaPredicted RBP28.77■■■□□ 2.2
CPSF6-205ENST00000550075 IFNLR1Q8IU57 520 aaPredicted RBP28.77■■■□□ 2.2
CPSF6-205ENST00000550075 FOXD4L4Q8WXT5 416 aaPredicted RBP28.77■■■□□ 2.2
CPSF6-205ENST00000550075 MYLIPQ8WY64 445 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 KIFAP3Q92845 792 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 SAMD11Q96NU1 681 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 NFKBIZQ9BYH8 718 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 PRDM12Q9H4Q4 367 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 ELAC1Q9H777 363 aaKnown RBP28.77■■■□□ 2.2
CPSF6-205ENST00000550075 GPRC5CQ9NQ84 441 aa28.77■■■□□ 2.2
CPSF6-205ENST00000550075 DGKIO75912 1065 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 FOSL2P15408 326 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 MARCKSP29966 332 aaPredicted RBP28.76■■■□□ 2.19
CPSF6-205ENST00000550075 TXLNAP40222 546 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 NASPP49321 788 aaPredicted RBP28.76■■■□□ 2.19
CPSF6-205ENST00000550075 GRB10Q13322 594 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 SLC39A14Q15043 492 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 STK38Q15208 465 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 TMEM119Q4V9L6 283 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 TWF2Q6IBS0 349 aaKnown RBP28.76■■■□□ 2.19
CPSF6-205ENST00000550075 FIBCD1Q8N539 461 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 TMEM161AQ9NX61 479 aa28.76■■■□□ 2.19
CPSF6-205ENST00000550075 SRPRBQ9Y5M8 271 aaKnown RBP28.76■■■□□ 2.19
CPSF6-205ENST00000550075 LRRIQ4A6NIV6 560 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 INO80B-WBP1J3KQ70 363 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 HOXA2O43364 376 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 ARHGEF15O94989 841 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 NCBP1Q09161 790 aaKnown RBP28.75■■■□□ 2.19
CPSF6-205ENST00000550075 ZBTB8OSQ8IWT0 167 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 ARNTL2Q8WYA1 636 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 IFT74Q96LB3 600 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 PNMA5Q96PV4 448 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 TIPINQ9BVW5 301 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 RC3H2Q9HBD1 1191 aaKnown RBP28.75■■■□□ 2.19
CPSF6-205ENST00000550075 AGPAT5Q9NUQ2 364 aa28.75■■■□□ 2.19
CPSF6-205ENST00000550075 FBXO2Q9UK22 296 aaPredicted RBP28.75■■■□□ 2.19
CPSF6-205ENST00000550075 SSBP05455 408 aaKnown RBP eCLIP28.74■■■□□ 2.19
CPSF6-205ENST00000550075 SKIP12755 728 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 RAB27AP51159 221 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 ERVK-21P61565 698 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 FAM189BP81408 668 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 BTG3Q14201 252 aaPredicted RBP28.74■■■□□ 2.19
CPSF6-205ENST00000550075 CMTR2Q8IYT2 770 aaKnown RBP28.74■■■□□ 2.19
CPSF6-205ENST00000550075 CRIPAKQ8N1N5 446 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 KRI1Q8N9T8 703 aaKnown RBP28.74■■■□□ 2.19
CPSF6-205ENST00000550075 C2orf40Q9H1Z8 148 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 RWDD3Q9Y3V2 267 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 RALGAPA2Q2PPJ7 1873 aa28.74■■■□□ 2.19
CPSF6-205ENST00000550075 GRIN1Q05586 938 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 KCNK18Q7Z418 384 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 ZNF689Q96CS4 500 aaPredicted RBP28.73■■■□□ 2.19
CPSF6-205ENST00000550075 DRC1Q96MC2 740 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 TRAIPQ9BWF2 469 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 CSRNP2Q9H175 543 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 MINDY3Q9H8M7 445 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 CERS4Q9HA82 394 aa28.73■■■□□ 2.19
CPSF6-205ENST00000550075 NLRC5Q86WI3 1866 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 A0A0U1RQF3 1178 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms