RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 DEFB103AP81534 67 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 KARSQ15046 597 aaKnown RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 NAALADL2Q58DX5 795 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 FOXD4L5Q5VV16 416 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 FAM109BQ6ICB4 259 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 DAW1Q8N136 415 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 FOXD4L4Q8WXT5 416 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 RAD54LQ92698 747 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 KIFAP3Q92845 792 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 FDXACB1Q9BRP7 624 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 ST3GAL5Q9UNP4 418 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 SLC4A7Q9Y6M7 1214 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 ENPP3O14638 875 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 GJB5O95377 273 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 FAM189BP81408 668 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 TFDP1Q14186 410 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 E2F4Q16254 413 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 SHC4Q6S5L8 630 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 RTN4RL1Q86UN2 441 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 KSR1Q8IVT5 923 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 HERC6Q8IVU3 1022 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 LARP4BQ92615 738 aaKnown RBP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 TOP1MTQ969P6 601 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-208ENST00000549995 C17orf75Q9HAS0 396 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 RGS18Q9NS28 235 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 PCDHA7Q9UN72 937 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 PCDHA11Q9Y5I1 949 aa13.21□□□□□ -0.29
PFDN5-208ENST00000549995 TRANK1O15050 2925 aa13.21□□□□□ -0.3
PFDN5-208ENST00000549995 A0A087X0B3 334 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 C9IYK1 514 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 MGEA5O60502 916 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 AMHP03971 560 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
PFDN5-208ENST00000549995 TXLNAP40222 546 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 NAMPTP43490 491 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 PHKA2P46019 1235 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 KCNJ6P48051 423 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 ZNF131P52739 623 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 MBTD1Q05BQ5 628 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 RAB30Q15771 203 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 AMHR2Q16671 573 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 FAM187BQ17R55 369 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 RESP18Q5W5W9 173 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 PRIMPOLQ96LW4 560 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 CCDC113Q9H0I3 377 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 ELAC1Q9H777 363 aaKnown RBP13.2□□□□□ -0.3
PFDN5-208ENST00000549995 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 C1orf112Q9NSG2 853 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-208ENST00000549995 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
PFDN5-208ENST00000549995 COL4A4P53420 1690 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-208ENST00000549995 PHLPP2Q6ZVD8 1323 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 AXLP30530 894 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 PPP2R5AQ15172 486 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 ZNF689Q96CS4 500 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-208ENST00000549995 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
PFDN5-208ENST00000549995 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 FZD8Q9H461 694 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
PFDN5-208ENST00000549995 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 HIP1RO75146 1068 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms