RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SLC7A3Q8WY07 619 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 CLP1Q92989 425 aaKnown RBP10.91□□□□□ -0.66
HDAC7-229ENST00000549883 LPPQ93052 612 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 ALG13Q9NP73 1137 aaKnown RBP10.91□□□□□ -0.66
HDAC7-229ENST00000549883 C1orf112Q9NSG2 853 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 ANKEF1Q9NU02 776 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 PCDHGC5Q9Y5F6 944 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 C5orf67F2Z3F1 127 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 H3BQV1 296 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 GLRA2P23416 452 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 ARL2P36404 184 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 CAPSQ13938 189 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 CAMK1Q14012 370 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 SKIV2LQ15477 1246 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 ZNF598Q86UK7 904 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 ZNF410Q86VK4 478 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 RNF149Q8NC42 400 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 NEK9Q8TD19 979 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 PSPC1Q8WXF1 523 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 BSNDQ8WZ55 320 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 MTRQ99707 1265 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 MMTAG2Q9BU76 263 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 POLR3CQ9BUI4 534 aaPredicted RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 TMEM161AQ9NX61 479 aa10.9□□□□□ -0.66
HDAC7-229ENST00000549883 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
HDAC7-229ENST00000549883 A0A0C4DFX4 3053 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 ITGB1P05556 798 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 RPA1P27694 616 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 HOXA11P31270 313 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 CCT6AP40227 531 aaKnown RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 PBX3P40426 434 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 KCNQ1P51787 676 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 ATP2C1P98194 919 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 ODR4Q5SWX8 454 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 UBXN11Q5T124 520 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 CATSPER4Q7RTX7 472 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 IGSF22Q8N9C0 903 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 MRPL38Q96DV4 380 aaKnown RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 SAMD11Q96NU1 681 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 POLR3FQ9H1D9 316 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 CWH43Q9H720 699 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 ATP6V0A4Q9HBG4 840 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 LRWD1Q9UFC0 647 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 USP20Q9Y2K6 914 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 KIF3AQ9Y496 699 aa10.89□□□□□ -0.67
HDAC7-229ENST00000549883 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.89□□□□□ -0.67
HDAC7-229ENST00000549883 A0A0U1RQF3 1178 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 TTLL13PA6NNM8 815 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 DLL1O00548 723 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 B4GALT5O43286 388 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 B4GALT3O60512 393 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 DGAT1O75907 488 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 SFPQP23246 707 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 IRS1P35568 1242 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 PHKA2P46019 1235 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 AFF1P51825 1210 aaKnown RBP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 PTENP60484 403 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 GRIN1Q05586 938 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 TCEAL5Q5H9L2 206 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 TWF2Q6IBS0 349 aaKnown RBP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 CDR2LQ86X02 465 aaPredicted RBP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 SPPL3Q8TCT6 385 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 HELQQ8TDG4 1101 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 TCP11Q8WWU5 503 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 CPB2Q96IY4 423 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 NACC1Q96RE7 527 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 PLIN2Q99541 437 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 ELAC1Q9H777 363 aaKnown RBP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 FAM105AQ9NUU6 356 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 DDX19AQ9NUU7 478 aaKnown RBP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
HDAC7-229ENST00000549883 KIAA1024Q9UPX6 916 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 MYH11P35749 1972 aa10.88□□□□□ -0.67
HDAC7-229ENST00000549883 VCANP13611 3396 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 VPS37CA5D8V6 355 aaPredicted RBP10.87□□□□□ -0.67
HDAC7-229ENST00000549883 VWA3AA6NCI4 1184 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 E9PMD0 336 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms