RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 TMEM177Q53S58 311 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 C1QL3Q5VWW1 255 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 C2orf69Q8N8R5 385 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 LENG9Q96B70 501 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 TCF25Q9BQ70 676 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 KANSL2Q9H9L4 492 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 IL23AQ9NPF7 189 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 FAM20BO75063 409 aa6.32□□□□□ -1.4
CCDC38-208ENST00000549876 FNTBP49356 437 aa6.32□□□□□ -1.4
CCDC38-208ENST00000549876 MECP2P51608 486 aaKnown RBP6.32□□□□□ -1.4
CCDC38-208ENST00000549876 SMAD3P84022 425 aaKnown RBP6.32□□□□□ -1.4
CCDC38-208ENST00000549876 FSTL1Q12841 308 aa6.32□□□□□ -1.4
CCDC38-208ENST00000549876 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
CCDC38-208ENST00000549876 RABL3Q5HYI8 236 aa6.32□□□□□ -1.4
CCDC38-208ENST00000549876 MBNL2Q5VZF2 373 aaKnown RBP6.32□□□□□ -1.4
CCDC38-208ENST00000549876 CLEC14AQ86T13 490 aa6.32□□□□□ -1.4
CCDC38-208ENST00000549876 SLC25A43Q8WUT9 341 aaPredicted RBP6.32□□□□□ -1.4
CCDC38-208ENST00000549876 GRXCR1A8MXD5 290 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 GCP02774 474 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 APPP05067 770 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 FBLP22087 321 aaKnown RBP6.31□□□□□ -1.4
CCDC38-208ENST00000549876 SLC6A3Q01959 620 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 ROM1Q03395 351 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 NFE2L2Q16236 605 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 FNDC3BQ53EP0 1204 aaKnown RBP6.31□□□□□ -1.4
CCDC38-208ENST00000549876 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 GPR150Q8NGU9 434 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 E2F7Q96AV8 911 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 MAML3Q96JK9 1138 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 MNTQ99583 582 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 BOCQ9BWV1 1114 aa6.31□□□□□ -1.4
CCDC38-208ENST00000549876 GOLGA8BA8MQT2 603 aa6.3□□□□□ -1.4
CCDC38-208ENST00000549876 DVL2O14641 736 aa6.3□□□□□ -1.4
CCDC38-208ENST00000549876 VSIG10L2P0DP72 767 aa6.3□□□□□ -1.4
CCDC38-208ENST00000549876 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
CCDC38-208ENST00000549876 HAPLN2Q9GZV7 340 aa6.3□□□□□ -1.4
CCDC38-208ENST00000549876 KCMF1Q9P0J7 381 aa6.3□□□□□ -1.4
CCDC38-208ENST00000549876 DNAJC8O75937 253 aaPredicted RBP6.29□□□□□ -1.4
CCDC38-208ENST00000549876 GLRX3O76003 335 aaKnown RBP6.29□□□□□ -1.4
CCDC38-208ENST00000549876 TOX4O94842 621 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 NR4A1P22736 598 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 MFSD5Q6N075 450 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 ZCCHC8Q6NZY4 707 aaKnown RBP6.29□□□□□ -1.4
CCDC38-208ENST00000549876 ZNF276Q8N554 614 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 MDGA1Q8NFP4 955 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 ATXN2LQ8WWM7 1075 aaKnown RBP6.29□□□□□ -1.4
CCDC38-208ENST00000549876 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 FZD1Q9UP38 647 aa6.29□□□□□ -1.4
CCDC38-208ENST00000549876 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 M0R2C6 588 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
CCDC38-208ENST00000549876 LMNAP02545 664 aaKnown RBP6.28□□□□□ -1.4
CCDC38-208ENST00000549876 IGFALSP35858 605 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 ZNF460Q14592 562 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 ARHGAP44Q17R89 818 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 NAIF1Q69YI7 327 aaPredicted RBP6.28□□□□□ -1.4
CCDC38-208ENST00000549876 SLFN12LQ6IEE8 588 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 VRK3Q8IV63 474 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 SH3TC2Q8TF17 1288 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 ZNF512Q96ME7 567 aaPredicted RBP6.28□□□□□ -1.4
CCDC38-208ENST00000549876 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 POLR3BQ9NW08 1133 aaPredicted RBP6.28□□□□□ -1.4
CCDC38-208ENST00000549876 SAMD15Q9P1V8 674 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 RCAN3Q9UKA8 241 aa6.28□□□□□ -1.4
CCDC38-208ENST00000549876 MFAP3LO75121 409 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 RHOBTB3O94955 611 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 ASLP04424 464 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 JUNP05412 331 aaKnown RBP6.27□□□□□ -1.41
CCDC38-208ENST00000549876 SDSP20132 328 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 KIF11P52732 1056 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 BMP8AQ7Z5Y6 402 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 DDX53Q86TM3 631 aaKnown RBP6.27□□□□□ -1.41
CCDC38-208ENST00000549876 PGBD4Q96DM1 585 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 MRFAP1L1Q96HT8 127 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 DYDC2Q96IM9 177 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 ZSWIM4Q9H7M6 989 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 TMEM260Q9NX78 707 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 TNPO3Q9Y5L0 923 aaKnown RBP6.27□□□□□ -1.41
CCDC38-208ENST00000549876 HS3ST4Q9Y661 456 aa6.27□□□□□ -1.41
CCDC38-208ENST00000549876 UBA6A0AVT1 1052 aaPredicted RBP6.26□□□□□ -1.41
CCDC38-208ENST00000549876 GRID2IPA4D2P6 1211 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 B4E1Z4 1266 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 KRT37O76014 449 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 ITGB1P05556 798 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 PRIMA1Q86XR5 153 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 MB21D1Q8N884 522 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 CHST14Q8NCH0 376 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 C16orf92Q96LL3 132 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 ACSS2Q9NR19 701 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 DNAI1Q9UI46 699 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 PACSIN3Q9UKS6 424 aa6.26□□□□□ -1.41
CCDC38-208ENST00000549876 OPA1O60313 960 aa6.25□□□□□ -1.41
CCDC38-208ENST00000549876 IPO13O94829 963 aaKnown RBP6.25□□□□□ -1.41
CCDC38-208ENST00000549876 HNRNPLP14866 589 aaKnown RBP eCLIP6.25□□□□□ -1.41
CCDC38-208ENST00000549876 SPIDRQ14159 915 aa6.25□□□□□ -1.41
CCDC38-208ENST00000549876 LY6G5CQ5SRR4 150 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms