RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 NR1D1P20393 614 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 LSP1P33241 339 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 VPS41P49754 854 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 BACE1P56817 501 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 AS3MTQ9HBK9 375 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 TISP43B9A030 160 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 MED24O75448 989 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 PSMD10O75832 226 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 PLA2G4BP0C869 781 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 GJC1P36383 396 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 PPP2R5CQ13362 524 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 COG2Q14746 738 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 PDXDC1Q6P996 788 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 B3GNT9Q6UX72 402 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 NIPA1Q7RTP0 329 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 GUF1Q8N442 669 aaKnown RBP12.06□□□□□ -0.48
LINC00661-204ENST00000549354 ERMNQ8TAM6 284 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 MAF1Q9H063 256 aa12.06□□□□□ -0.48
LINC00661-204ENST00000549354 BCRP11274 1271 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 MUTP22033 750 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 SLC12A3P55017 1021 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 KCNH2Q12809 1159 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 MMS22LQ6ZRQ5 1243 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 ARHGAP27Q6ZUM4 889 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 SFR1Q86XK3 245 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 CATSPER3Q86XQ3 398 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 AGBL1Q96MI9 1066 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 USP20Q9Y2K6 914 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 EIF4E1BA6NMX2 242 aaKnown RBP12.05□□□□□ -0.48
LINC00661-204ENST00000549354 C19orf81C9J6K1 198 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 KRT13P13646 458 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 NMT1P30419 496 aaKnown RBP12.05□□□□□ -0.48
LINC00661-204ENST00000549354 MTM1Q13496 603 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 MTMR2Q13614 643 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 HGSNATQ68CP4 663 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 EMBQ6PCB8 327 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 DAAM2Q86T65 1068 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
LINC00661-204ENST00000549354 ZNF280CQ8ND82 737 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 FAM118BQ9BPY3 351 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 CCPG1Q9ULG6 757 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 PCDHA2Q9Y5H9 948 aa12.05□□□□□ -0.48
LINC00661-204ENST00000549354 TMEM150BA6NC51 233 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 FOXO6A8MYZ6 492 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 FLT3P36888 993 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 PTK2Q05397 1052 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 ACTN3Q08043 901 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 CEP55Q53EZ4 464 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 KCNV1Q6PIU1 500 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 OTOP1Q7RTM1 612 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 MGARPQ8TDB4 240 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 SH3GL2Q99962 352 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 HSD17B14Q9BPX1 270 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 OSGEPQ9NPF4 335 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 COL4A3BPQ9Y5P4 624 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 DCDC2CA8MYV0 355 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 IFNAR2P48551 515 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 CDR1P51861 262 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 SETQ01105 290 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 ZFYVE27Q5T4F4 411 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 LRRC55Q6ZSA7 311 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 REPS2Q8NFH8 660 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 MDM1Q8TC05 714 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 TRIM51Q9BSJ1 452 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 LRRC4CQ9HCJ2 640 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 GOLGA6L10A6NI86 522 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 CYP11B2P19099 503 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 KCNA4P22459 653 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 OAZ1P54368 228 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 PAK2Q13177 524 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 ASIC2Q16515 512 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 SYT2Q8N9I0 419 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 THOC1Q96FV9 657 aaKnown RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-204ENST00000549354 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 GGA3Q9NZ52 723 aa12.04□□□□□ -0.48
LINC00661-204ENST00000549354 NOL4O94818 638 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 GUCY2CP25092 1073 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 CTNNA1P35221 906 aaKnown RBP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 SPP2Q13103 211 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 SUPT20HL1Q3ZLR7 823 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 CEP57Q86XR8 500 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 CCT8L2Q96SF2 557 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms