RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 CCDC149Q6ZUS6 474 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 NIPA1Q7RTP0 329 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 C1orf210Q8IVY1 113 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
DDX54-206ENST00000549271 SDF4Q9BRK5 362 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 ZBP1Q9H171 429 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 TBC1D17Q9HA65 648 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 MIA3Q5JRA6 1907 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 IGKV6D-21A0A0A0MT36 114 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 STK25O00506 426 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 ZBTB43O43298 467 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
DDX54-206ENST00000549271 CFHP08603 1231 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 KLRC1P26715 233 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 CDC27P30260 824 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 SREBF1P36956 1147 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 CLK2P49760 499 aaKnown RBP13.82□□□□□ -0.2
DDX54-206ENST00000549271 STAT5BP51692 787 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 NAPAP54920 295 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 ITGB3BPQ13352 177 aaPredicted RBP13.82□□□□□ -0.2
DDX54-206ENST00000549271 AP3B2Q13367 1082 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 CLLU1OSQ5K130 101 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 FBXL16Q8N461 479 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 SFXN1Q9H9B4 322 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 AGO4Q9HCK5 861 aaKnown RBP13.82□□□□□ -0.2
DDX54-206ENST00000549271 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 PATJQ8NI35 1801 aa13.82□□□□□ -0.2
DDX54-206ENST00000549271 KLF18A0A0U1RQI7 1052 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 N4BP1O75113 896 aaKnown RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 DCNP07585 359 aaKnown RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 RPS6KB1P23443 525 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 ADCY7P51828 1080 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 CRYBB1P53674 252 aaPredicted RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 GIT2Q14161 759 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 RTN1Q16799 776 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 LETM2Q2VYF4 491 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 Q6ZUG5 572 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 CABP7Q86V35 215 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 MAML2Q8IZL2 1156 aaPredicted RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 AUTS2Q8WXX7 1259 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 AGXT2Q9BYV1 514 aa13.81□□□□□ -0.2
DDX54-206ENST00000549271 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
DDX54-206ENST00000549271 SMCO2A6NFE2 343 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 POTEMA6NI47 508 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 NT5C1B-RDH14C9J2C7 533 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 KINO60870 393 aaKnown RBP13.8□□□□□ -0.2
DDX54-206ENST00000549271 ADRB1P08588 477 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 CTSAP10619 480 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 CA8P35219 290 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
DDX54-206ENST00000549271 POLGP54098 1239 aaPredicted RBP13.8□□□□□ -0.2
DDX54-206ENST00000549271 BCAR1P56945 870 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 KIZQ2M2Z5 673 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 SPECC1Q5M775 1068 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
DDX54-206ENST00000549271 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 ABHD15Q6UXT9 468 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 C15orf39Q6ZRI6 1047 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 ECHDC2Q86YB7 292 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 CRYGNQ8WXF5 182 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 RSAD2Q8WXG1 361 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 OSMRQ99650 979 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 CA14Q9ULX7 337 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
DDX54-206ENST00000549271 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 HBP1O60381 514 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 GPR32O75388 356 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 CYP3A4P08684 503 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 SRFP11831 508 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 GLULP15104 373 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 RFX1P22670 979 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 ALDH7A1P49419 539 aaKnown RBP13.79□□□□□ -0.2
DDX54-206ENST00000549271 METAP2P50579 478 aaKnown RBP eCLIP13.79□□□□□ -0.25e-7■■■□□ 16.5
DDX54-206ENST00000549271 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 ZNF528Q3MIS6 628 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 PPFIBP1Q86W92 1011 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
DDX54-206ENST00000549271 SLC44A3Q8N4M1 653 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 BRF1Q92994 677 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 COL1A2P08123 1366 aa13.79□□□□□ -0.2
DDX54-206ENST00000549271 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
DDX54-206ENST00000549271 IGLV3-22A0A075B6J6 115 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms