RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 OTOP3Q7RTS5 596 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 CKAP2LQ8IYA6 745 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 DTWD2Q8NBA8 298 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 HELQQ8TDG4 1101 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 IGSF21Q96ID5 467 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 SFXN1Q9H9B4 322 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 CHST12Q9NRB3 414 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
CDX2-202ENST00000548877 BARHL2Q9NY43 387 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 PCDHA10Q9Y5I2 948 aa15.33■□□□□ 0.04
CDX2-202ENST00000548877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.32■□□□□ 0.04
CDX2-202ENST00000548877 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 NT5C1B-RDH14C9J2C7 533 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 PSAPP07602 524 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDX2-202ENST00000548877 SETQ01105 290 aaPredicted RBP15.32■□□□□ 0.04
CDX2-202ENST00000548877 C15orf39Q6ZRI6 1047 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 TMEM173Q86WV6 379 aaPredicted RBP15.32■□□□□ 0.04
CDX2-202ENST00000548877 FLCNQ8NFG4 579 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 RHOBTB2Q9BYZ6 727 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 IGSF9Q9P2J2 1179 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 STK39Q9UEW8 545 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
CDX2-202ENST00000548877 FRYLO94915 3013 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 GALTP07902 379 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 CDC42EP1Q00587 391 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 TMC5Q6UXY8 1006 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 CCDC149Q6ZUS6 474 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 CABP7Q86V35 215 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 MICU3Q86XE3 530 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 RAB11FIP4Q86YS3 637 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 AUTS2Q8WXX7 1259 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 ZNF577Q9BSK1 485 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 KCNK12Q9HB15 430 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 GABBR1Q9UBS5 961 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 WNT16Q9UBV4 365 aa15.31■□□□□ 0.04
CDX2-202ENST00000548877 ZNF862O60290 1169 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 LILRB3O75022 631 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 ZNF623O75123 536 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 PAPLNO95428 1278 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 CIITAP33076 1130 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 PHKA2P46019 1235 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 PTPN14Q15678 1187 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 OTOGLQ3ZCN5 2332 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 LRRC71Q8N4P6 559 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 RNF169Q8NCN4 708 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 CMASQ8NFW8 434 aaPredicted RBP15.3■□□□□ 0.04
CDX2-202ENST00000548877 FEZF2Q8TBJ5 459 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
CDX2-202ENST00000548877 NRDE2Q9H7Z3 1164 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 NRBP2Q9NSY0 501 aa15.3■□□□□ 0.04
CDX2-202ENST00000548877 V9GY48 417 aaPredicted RBP15.3■□□□□ 0.04
CDX2-202ENST00000548877 DOCK8Q8NF50 2099 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 DNAH14Q0VDD8 3507 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 ESYT2A0FGR8 921 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 SLC27A2O14975 620 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 LMNAP02545 664 aaKnown RBP15.29■□□□□ 0.04
CDX2-202ENST00000548877 OATP04181 439 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 SKIP12755 728 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 CLCN4P51793 760 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 TARBP2Q15633 366 aaKnown RBP15.29■□□□□ 0.04
CDX2-202ENST00000548877 LETM2Q2VYF4 491 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 CYP26C1Q6V0L0 522 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 SYNE3Q6ZMZ3 975 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 SIX5Q8N196 739 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
CDX2-202ENST00000548877 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 VN1R3Q9BXE9 311 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 TBC1D13Q9NVG8 400 aa15.29■□□□□ 0.04
CDX2-202ENST00000548877 WDR64B1ANS9 1081 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
CDX2-202ENST00000548877 NOMO2Q5JPE7 1267 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 NXPE3Q969Y0 559 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 LENG9Q96B70 501 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 KLHL5Q96PQ7 755 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 LRRC2Q9BYS8 371 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 ZMYND12Q9H0C1 365 aa15.28■□□□□ 0.04
CDX2-202ENST00000548877 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
CDX2-202ENST00000548877 IGKV6-21A0A0C4DH24 114 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 OFD1O75665 1012 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 FGFR4P22455 802 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 CA8P35219 290 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 RCAN1P53805 252 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 RTN1Q16799 776 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 GLB1LQ6UWU2 654 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 CEP89Q96ST8 783 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 EMILIN2Q9BXX0 1053 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 GCOM2Q9BZD3 368 aaPredicted RBP15.27■□□□□ 0.04
CDX2-202ENST00000548877 DISC1Q9NRI5 854 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 EPS15L1Q9UBC2 864 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 TCEAL9Q9UHQ7 104 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 FBXL21Q9UKT6 434 aa15.27■□□□□ 0.04
CDX2-202ENST00000548877 CEP250Q9BV73 2442 aa15.27■□□□□ 0.03
CDX2-202ENST00000548877 MTCL1Q9Y4B5 1905 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 MED19A0JLT2 244 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms