RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CUL4BQ13620 913 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 MBTPS1Q14703 1052 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 PPP2R5AQ15172 486 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 IFNLR1Q8IU57 520 aaPredicted RBP23.33■■□□□ 1.33
CACNB3-210ENST00000548874 GPT2Q8TD30 523 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 NLRP4Q96MN2 994 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 PPP1R16BQ96T49 567 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 BLZF1Q9H2G9 400 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 IFT122Q9HBG6 1241 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 PRKAG2Q9UGJ0 569 aa23.33■■□□□ 1.33
CACNB3-210ENST00000548874 A0A087WZ62 844 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 TBCAO75347 108 aaKnown RBP23.32■■□□□ 1.32
CACNB3-210ENST00000548874 FAM13AO94988 1023 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 PRR29P0C7W0 189 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 NAMPTP43490 491 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 TFDP1Q14186 410 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 GPNMBQ14956 572 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 RNF149Q8NC42 400 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 CCDC34Q96HJ3 373 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 ZNF668Q96K58 619 aaPredicted RBP23.32■■□□□ 1.32
CACNB3-210ENST00000548874 IFT74Q96LB3 600 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 FDXACB1Q9BRP7 624 aaPredicted RBP23.32■■□□□ 1.32
CACNB3-210ENST00000548874 NFKBIZQ9BYH8 718 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 PARVGQ9HBI0 331 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 SQORQ9Y6N5 450 aa23.32■■□□□ 1.32
CACNB3-210ENST00000548874 LTBP2Q14767 1821 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.31■■□□□ 1.32
CACNB3-210ENST00000548874 PARNO95453 639 aaKnown RBP23.31■■□□□ 1.32
CACNB3-210ENST00000548874 SRGAP2CP0DJJ0 459 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 NPTX2P47972 431 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 CCL23P55773 120 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 PEX3P56589 373 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 PTENP60484 403 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 ASIC1P78348 528 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 DPYDQ12882 1025 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 POSTNQ15063 836 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 FBXO47Q5MNV8 452 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 CDCA2Q69YH5 1023 aaPredicted RBP23.31■■□□□ 1.32
CACNB3-210ENST00000548874 MFSD5Q6N075 450 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 TMEM40Q8WWA1 233 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 SPIRE2Q8WWL2 714 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 NLRP7Q8WX94 980 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 OSMRQ99650 979 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 NTPCRQ9BSD7 190 aaKnown RBP23.31■■□□□ 1.32
CACNB3-210ENST00000548874 LARSQ9P2J5 1176 aaKnown RBP23.31■■□□□ 1.32
CACNB3-210ENST00000548874 NR2E3Q9Y5X4 410 aa23.31■■□□□ 1.32
CACNB3-210ENST00000548874 PVALEFA0A1B0GWK0 134 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 IDEP14735 1019 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 DARSP14868 501 aaKnown RBP23.3■■□□□ 1.32
CACNB3-210ENST00000548874 GAP43P17677 238 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 DMP1Q13316 513 aaPredicted RBP23.3■■□□□ 1.32
CACNB3-210ENST00000548874 UNC13DQ70J99 1090 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 SCLYQ96I15 445 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 FIZ1Q96SL8 496 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 GCOM2Q9BZD3 368 aaPredicted RBP23.3■■□□□ 1.32
CACNB3-210ENST00000548874 OSBPL7Q9BZF2 842 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 PANK4Q9NVE7 773 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 SEL1LQ9UBV2 794 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 ZMYND8Q9ULU4 1186 aaPredicted RBP23.3■■□□□ 1.32
CACNB3-210ENST00000548874 GINS2Q9Y248 185 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 ADGRA3Q8IWK6 1321 aa23.3■■□□□ 1.32
CACNB3-210ENST00000548874 MYH11P35749 1972 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 LRRIQ4A6NIV6 560 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 KLRC4O43908 158 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 NBNO60934 754 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 MBD3O95983 291 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 SYN1P17600 705 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 EIF4BP23588 611 aaKnown RBP23.29■■□□□ 1.32
CACNB3-210ENST00000548874 RFC2P35250 354 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 PHKA2P46019 1235 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 EHHADHQ08426 723 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 LPIN1Q14693 890 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 ODR4Q5SWX8 454 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 SRGAP1Q7Z6B7 1085 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 SFR1Q86XK3 245 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 CCDC65Q8IXS2 484 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 MYCT1Q8N699 235 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 KCNN1Q92952 543 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 SCLT1Q96NL6 688 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 ZHX3Q9H4I2 956 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 KCNG1Q9UIX4 513 aa23.29■■□□□ 1.32
CACNB3-210ENST00000548874 CXCL10P02778 98 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 NCKAP1LP55160 1127 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 COASYQ13057 564 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 PNOCQ13519 176 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 USP38Q8NB14 1042 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 DEPTORQ8TB45 409 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 VWCEQ96DN2 955 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 KIFC3Q9BVG8 833 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 C2orf40Q9H1Z8 148 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 MINDY3Q9H8M7 445 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 KMT5AQ9NQR1 393 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 OLFML3Q9NRN5 406 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 PCDH10Q9P2E7 1040 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 ARHGAP28Q9P2N2 729 aa23.28■■□□□ 1.32
CACNB3-210ENST00000548874 HOOK1Q9UJC3 728 aaKnown RBP23.28■■□□□ 1.32
CACNB3-210ENST00000548874 NOC2LQ9Y3T9 749 aaKnown RBP23.28■■□□□ 1.32
CACNB3-210ENST00000548874 TRAK2O60296 914 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 GHRP10912 638 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 SMTNP53814 917 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms