RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PSMA7O14818 248 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 EIF3DO15371 548 aaKnown RBP eCLIP31.73■■■□□ 2.67
BRF1-213ENST00000548421 MYBP10242 640 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 ERCC5P28715 1186 aaPredicted RBP31.73■■■□□ 2.67
BRF1-213ENST00000548421 NAMPTP43490 491 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 ALCAMQ13740 583 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 FAM47CQ5HY64 1035 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 SCFD1Q8WVM8 642 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 ST6GALNAC4Q9H4F1 302 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 DNAH12Q6ZR08 3092 aa31.73■■■□□ 2.67
BRF1-213ENST00000548421 GRIN2DO15399 1336 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 UBE4BO95155 1302 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 GJB1P08034 283 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 ITGA7Q13683 1181 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 DHTKD1Q96HY7 919 aaPredicted RBP31.72■■■□□ 2.67
BRF1-213ENST00000548421 CRISPLD2Q9H0B8 497 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 CTNND2Q9UQB3 1225 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 PCDHB13Q9Y5F0 798 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 SMIM35A0A1B0GVV1 85 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 SLC16A4O15374 487 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 LAMTOR4Q0VGL1 99 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 PAK1Q13153 545 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 BMT2Q1RMZ1 405 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 L1TD1Q5T7N2 865 aaKnown RBP31.72■■■□□ 2.67
BRF1-213ENST00000548421 U2AF1L4Q8WU68 220 aaKnown RBP31.72■■■□□ 2.67
BRF1-213ENST00000548421 MAP7D2Q96T17 732 aa31.72■■■□□ 2.67
BRF1-213ENST00000548421 H0YCG3 227 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 ASAP2O43150 1006 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 TREHO43280 583 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 PPP1R37O75864 691 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 SGPL1O95470 568 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 CYP2C9P11712 490 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 PTPN11Q06124 597 aaPredicted RBP31.71■■■□□ 2.67
BRF1-213ENST00000548421 CAPSQ13938 189 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 HAUS6Q7Z4H7 955 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 RHPN2Q8IUC4 686 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 NELFBQ8WX92 580 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 STRA6Q9BX79 667 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 CBX8Q9HC52 389 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 STARD7Q9NQZ5 370 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 AKT3Q9Y243 479 aa31.71■■■□□ 2.67
BRF1-213ENST00000548421 SIP14410 1827 aa31.7■■■□□ 2.67
BRF1-213ENST00000548421 LRRIQ4A6NIV6 560 aa31.7■■■□□ 2.66
BRF1-213ENST00000548421 ZNF200P98182 395 aaPredicted RBP31.7■■■□□ 2.66
BRF1-213ENST00000548421 ZC2HC1CQ53FD0 456 aaPredicted RBP31.7■■■□□ 2.66
BRF1-213ENST00000548421 GDF6Q6KF10 455 aaPredicted RBP31.7■■■□□ 2.66
BRF1-213ENST00000548421 KIAA0319LQ8IZA0 1049 aa31.7■■■□□ 2.66
BRF1-213ENST00000548421 TMEM161BQ8NDZ6 487 aa31.7■■■□□ 2.66
BRF1-213ENST00000548421 ZNF507Q8TCN5 953 aa31.7■■■□□ 2.66
BRF1-213ENST00000548421 KIFC3Q9BVG8 833 aa31.7■■■□□ 2.66
BRF1-213ENST00000548421 RWDD2AQ9UIY3 292 aa31.7■■■□□ 2.66
BRF1-213ENST00000548421 ADGRA3Q8IWK6 1321 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 PRPF6O94906 941 aaKnown RBP31.69■■■□□ 2.66
BRF1-213ENST00000548421 SCP2P22307 547 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 ABCD1P33897 745 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 GTF2BQ00403 316 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 TFDP1Q14186 410 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 KSR1Q8IVT5 923 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 RNF214Q8ND24 703 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 DEPTORQ8TB45 409 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 ARHGAP28Q9P2N2 729 aa31.69■■■□□ 2.66
BRF1-213ENST00000548421 A0A0U1RQG5 324 aaPredicted RBP31.68■■■□□ 2.66
BRF1-213ENST00000548421 RUFY4Q6ZNE9 571 aa31.68■■■□□ 2.66
BRF1-213ENST00000548421 HVCN1Q96D96 273 aa31.68■■■□□ 2.66
BRF1-213ENST00000548421 RBSNQ9H1K0 784 aa31.68■■■□□ 2.66
BRF1-213ENST00000548421 TFRCP02786 760 aaKnown RBP31.67■■■□□ 2.66
BRF1-213ENST00000548421 CCNE1P24864 410 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 GSE1Q14687 1217 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 IQCB1Q15051 598 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 TAF2Q6P1X5 1199 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 NELFCDQ8IXH7 590 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 AOPEPQ8N6M6 819 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 RNF149Q8NC42 400 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 KCNN1Q92952 543 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 P2RX5Q93086 422 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 MCOLN1Q9GZU1 580 aa31.67■■■□□ 2.66
BRF1-213ENST00000548421 FAM49AQ9H0Q0 323 aaPredicted RBP31.67■■■□□ 2.66
BRF1-213ENST00000548421 BICDL2A1A5D9 508 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 DENND3A2RUS2 1198 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 SRGAP2CP0DJJ0 459 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 STX17P56962 302 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 MYL5Q02045 173 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 KNOP1Q1ED39 458 aaKnown RBP31.66■■■□□ 2.66
BRF1-213ENST00000548421 CENPPQ6IPU0 288 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 DHX40Q8IX18 779 aaKnown RBP31.66■■■□□ 2.66
BRF1-213ENST00000548421 ENOX1Q8TC92 643 aaKnown RBP31.66■■■□□ 2.66
BRF1-213ENST00000548421 NLRP4Q96MN2 994 aa31.66■■■□□ 2.66
BRF1-213ENST00000548421 BECN2A8MW95 431 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 IKBKBO14920 756 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 VTNP04004 478 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 HOXD13P35453 343 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 GJA8P48165 433 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 CDC42EP1Q00587 391 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 CDCA2Q69YH5 1023 aaPredicted RBP31.65■■■□□ 2.66
BRF1-213ENST00000548421 LUZP1Q86V48 1076 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 SLC43A3Q8NBI5 491 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 MED15Q96RN5 788 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 SEZ6LQ9BYH1 1024 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 C2orf40Q9H1Z8 148 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 SMTNL1A8MU46 457 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms