RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZNF558Q96NG5 402 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 PIGSQ96S52 555 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 ADAM2Q99965 735 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 MYL10Q9BUA6 226 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 RGS18Q9NS28 235 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 ZNF215Q9UL58 517 aaPredicted RBP15.98■□□□□ 0.15
PTCH1-217ENST00000548420 TRPV2Q9Y5S1 764 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 BAZ2BQ9UIF8 2168 aaKnown RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 KANSL1LA0AUZ9 987 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 DHX16O60231 1041 aaKnown RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 LRP3O75074 770 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 CFBP00751 764 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 TDGF1P13385 188 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 GBP2P32456 591 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 CA8P35219 290 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 GNAQP50148 359 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 HSD17B4P51659 736 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 TRAF1Q13077 416 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 METTL7BQ6UX53 244 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 NFXL1Q6ZNB6 911 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 SRBD1Q8N5C6 995 aaKnown RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 FANCBQ8NB91 859 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 CTCFLQ8NI51 663 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 GLG1Q92896 1179 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 RPP25Q9BUL9 199 aaKnown RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 MAP3K20Q9NYL2 800 aaKnown RBP15.97■□□□□ 0.15
PTCH1-217ENST00000548420 PCDHA1Q9Y5I3 950 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 SLC12A7Q9Y666 1083 aa15.97■□□□□ 0.15
PTCH1-217ENST00000548420 MYH6P13533 1939 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 TOP3BO95985 862 aaKnown RBP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 PPM1AP35813 382 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 FAM189BP81408 668 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 NFX1Q12986 1120 aaKnown RBP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 SNW1Q13573 536 aaKnown RBP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 NONOQ15233 471 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 CCDC6Q16204 474 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 IER5Q5VY09 327 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 IL31Q6EBC2 164 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 GATA6Q92908 595 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 AGXT2Q9BYV1 514 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 CELF4Q9BZC1 486 aaKnown RBP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 ZBP1Q9H171 429 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 CDHR5Q9HBB8 845 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 PRMT8Q9NR22 394 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-217ENST00000548420 RXFP3Q9NSD7 469 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 BRPF3Q9ULD4 1205 aa15.96■□□□□ 0.15
PTCH1-217ENST00000548420 ADAMTS20P59510 1910 aa15.96■□□□□ 0.14
PTCH1-217ENST00000548420 FAM170BA6NMN3 283 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 KCNK5O95279 499 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 CD72P21854 359 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 RCAN1P53805 252 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 GPC5P78333 572 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 SLC24A5Q71RS6 500 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 TMEM173Q86WV6 379 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-217ENST00000548420 BBXQ8WY36 941 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-217ENST00000548420 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 JAKMIP1Q96N16 626 aaKnown RBP15.95■□□□□ 0.14
PTCH1-217ENST00000548420 NOC2LQ9Y3T9 749 aaKnown RBP15.95■□□□□ 0.14
PTCH1-217ENST00000548420 IRAK3Q9Y616 596 aa15.95■□□□□ 0.14
PTCH1-217ENST00000548420 MYH15Q9Y2K3 1946 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 SDK1Q7Z5N4 2213 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 ANHXE9PGG2 379 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 CPA1P15085 419 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 RXRAP19793 462 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 MARK3P27448 753 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 HOXA13P31271 388 aaPredicted RBP15.94■□□□□ 0.14
PTCH1-217ENST00000548420 IGBP1P78318 339 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 SP4Q02446 784 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 HTR4Q13639 388 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 UBXN2BQ14CS0 331 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 TMTC3Q6ZXV5 915 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 HOMER1Q86YM7 354 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 VPS52Q8N1B4 723 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 TMEM40Q8WWA1 233 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 NXPE3Q969Y0 559 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 TMEM117Q9H0C3 514 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 ATP6V0A4Q9HBG4 840 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 WDR6Q9NNW5 1121 aaKnown RBP15.94■□□□□ 0.14
PTCH1-217ENST00000548420 FAM217BQ9NTX9 383 aaPredicted RBP15.94■□□□□ 0.14
PTCH1-217ENST00000548420 TMEM161AQ9NX61 479 aa15.94■□□□□ 0.14
PTCH1-217ENST00000548420 LAMA5O15230 3695 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 SPATA31C2B4DYI2 1134 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 PSMA5P28066 241 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 LIMK1P53667 647 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 MRPS9P82933 396 aaKnown RBP15.93■□□□□ 0.14
PTCH1-217ENST00000548420 FUT2Q10981 343 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 FZD5Q13467 585 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 BLOC1S2Q6QNY1 142 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 SYNE3Q6ZMZ3 975 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 C15orf39Q6ZRI6 1047 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 CLDN23Q96B33 292 aa15.93■□□□□ 0.14
PTCH1-217ENST00000548420 RRP36Q96EU6 259 aaKnown RBP15.93■□□□□ 0.14
PTCH1-217ENST00000548420 TM6SF1Q9BZW5 370 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms