RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 SREBF2Q12772 1141 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 SLC9A5Q14940 896 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 NCAPHQ15003 741 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 TBC1D9BQ66K14 1250 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 MRM1Q6IN84 353 aaKnown RBP5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 POMZP3Q6PJE2 187 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 LIPIQ6XZB0 460 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 TEX2Q8IWB9 1127 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 FAM178BQ8IXR5 827 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 KREMEN2Q8NCW0 462 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 BTN2A2Q8WVV5 523 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 DDX11Q96FC9 970 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 PTCH2Q9Y6C5 1203 aa5.35□□□□□ -1.55
TRAFD1-204ENST00000548092 DNAH12Q6ZR08 3092 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ZNF646O15015 1829 aaPredicted RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 WDR87Q6ZQQ6 2873 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 KLRG2A4D1S0 409 aaPredicted RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ERVV-2B6SEH9 535 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ERCC5P28715 1186 aaPredicted RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 FKBP1BP68106 108 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ST5P78524 1137 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 CXCL9Q07325 125 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 CACNB2Q08289 660 aaPredicted RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 RTP5Q14D33 572 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 PRSS53Q2L4Q9 553 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 LARP1BQ659C4 914 aaKnown RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 FRMD5Q7Z6J6 570 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 NIM1KQ8IY84 436 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 IFNL2Q8IZJ0 200 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 FAM26EQ8N5C1 309 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 CPA5Q8WXQ8 436 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ZNF428Q96B54 188 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 CDCA5Q96FF9 252 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 CDX2Q99626 313 aaPredicted RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 LRFN3Q9BTN0 628 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 CAPN10Q9HC96 672 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 NUDT5Q9UKK9 219 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ZBTB1Q9Y2K1 713 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 DUSP10Q9Y6W6 482 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 POLR2AP24928 1970 aaKnown RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ALPK3Q96L96 1907 aa5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 ZFHX2Q9C0A1 2572 aaPredicted RBP5.34□□□□□ -1.55
TRAFD1-204ENST00000548092 REV3LO60673 3130 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 DNAH14Q0VDD8 3507 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 C22orf46C9J442 243 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 CAPNS1P04632 268 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 C8BP07358 591 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 FPR2P25090 351 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 ECI1P42126 302 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 SV2CQ496J9 727 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 NT5DC1Q5TFE4 455 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 DENND5AQ6IQ26 1287 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 STK32CQ86UX6 486 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 FERMT3Q86UX7 667 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 ZNF227Q86WZ6 799 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 DNAJC10Q8IXB1 793 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 CARFQ8N187 725 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 FAM43AQ8N2R8 423 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 CRACR2BQ8N4Y2 399 aaPredicted RBP5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 PKNOX2Q96KN3 472 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 UHRF1Q96T88 793 aaPredicted RBP5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 PRKRIP1Q9H875 184 aaPredicted RBP5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 ACTR10Q9NZ32 417 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 FBXL7Q9UJT9 491 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 NUDCQ9Y266 331 aa5.33□□□□□ -1.56
TRAFD1-204ENST00000548092 PTPRZ1P23471 2315 aaPredicted RBP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 ZNF292O60281 2723 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 TCERG1O14776 1098 aaKnown RBP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 SUSD5O60279 629 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 DDAH1O94760 285 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 SSBP05455 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 LCP1P13796 627 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 HOXC12P31275 282 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 BCL6P41182 706 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 SMAD4Q13485 552 aaKnown RBP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 RRS1Q15050 365 aaKnown RBP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 CEP68Q76N32 757 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 NLRP10Q86W26 655 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 LINC00482Q8N8I6 264 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 USP38Q8NB14 1042 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 RCBTB1Q8NDN9 531 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 SH3TC2Q8TF17 1288 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 ZBTB8AQ96BR9 441 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 TEPSINQ96N21 525 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 GORASP1Q9BQQ3 440 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 PRKAG3Q9UGI9 489 aa5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 CNOT7Q9UIV1 285 aaKnown RBP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 RIF1Q5UIP0 2472 aaKnown RBP5.32□□□□□ -1.56
TRAFD1-204ENST00000548092 CACNA1HO95180 2353 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 CHD9Q3L8U1 2897 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 H7C1D1 291 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 PPIP5K2O43314 1243 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 NOBOXO60393 691 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 CELA3BP08861 270 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 NAT2P11245 290 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 CYP19A1P11511 503 aaPredicted RBP5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 GRIA2P42262 883 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 MAGEA10P43363 369 aaPredicted RBP5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 NFKB2Q00653 900 aa5.31□□□□□ -1.56
TRAFD1-204ENST00000548092 HSP90AB2PQ58FF8 381 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms