RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 ASAP3Q8TDY4 903 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 TMEM40Q8WWA1 233 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 HERVK_113Q902F9 699 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 FDXACB1Q9BRP7 624 aaPredicted RBP12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 NFKBIZQ9BYH8 718 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 OSBPL7Q9BZF2 842 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 INO80BQ9C086 356 aaPredicted RBP12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 MAGEF1Q9HAY2 307 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 GPRC5CQ9NQ84 441 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 ODF2LQ9ULJ1 636 aa12.61□□□□□ -0.39
CALCOCO1-208ENST00000547988 TDRD15B5MCY1 1934 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 TRIP11Q15643 1979 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 RALGAPA2Q2PPJ7 1873 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 ABHD14A-ACY1A0A1B0GW23 586 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 GPR182O15218 404 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 POLR2DO15514 142 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 HIP1RO75146 1068 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 SRGAP2CP0DJJ0 459 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 CAPSQ13938 189 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 IKBKEQ14164 716 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 DHX8Q14562 1220 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 E2F4Q16254 413 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 SV2BQ7L1I2 683 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 SRGAP1Q7Z6B7 1085 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 RNF149Q8NC42 400 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 DBF4BQ8NFT6 615 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 MRPS27Q92552 414 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 IFT74Q96LB3 600 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 FTHL17Q9BXU8 183 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 AGO3Q9H9G7 860 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 KCNH3Q9ULD8 1083 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 PADI3Q9ULW8 664 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 HPSEQ9Y251 543 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 NOC2LQ9Y3T9 749 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 KIAA1671Q9BY89 1806 aa12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 RANBP2P49792 3224 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-208ENST00000547988 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 PFKFB1P16118 471 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 CD52P31358 61 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 NAMPTP43490 491 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 PTENP60484 403 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 MAPK7Q13164 816 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 PCBP1Q15365 356 aaKnown RBP eCLIP12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 SHHQ15465 462 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 ARSHQ5FYA8 562 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 RASIP1Q5U651 963 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 FAM228AQ86W67 206 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 DHX58Q96C10 678 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 ZNF668Q96K58 619 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 REEP2Q9BRK0 252 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 C2orf40Q9H1Z8 148 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 ERVK-5Q9HDB9 667 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
CALCOCO1-208ENST00000547988 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 LRRIQ4A6NIV6 560 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 KRT18P05783 430 aaKnown RBP12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 AMPD3Q01432 767 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 RAD51AP2Q09MP3 1159 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 NFX1Q12986 1120 aaKnown RBP12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 DMP1Q13316 513 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 CDCA2Q69YH5 1023 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 ZBTB8OSQ8IWT0 167 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 DAW1Q8N136 415 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 FSIP1Q8NA03 581 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 BSNDQ8WZ55 320 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 PHLPP2Q6ZVD8 1323 aa12.58□□□□□ -0.4
CALCOCO1-208ENST00000547988 TRIOBPQ9H2D6 2365 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 NPHP3-ACAD11A0A0J9YXS1 232 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 MYMKA6NI61 221 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 TBCAO75347 108 aaKnown RBP12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 SLFN14P0C7P3 912 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 PLS3P13797 630 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 SYKP43405 635 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 KCNJ6P48051 423 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 NDUFA8P51970 172 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 ZNF131P52739 623 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms