RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 TMEM173Q86WV6 379 aaPredicted RBP11.19□□□□□ -0.62
R3HDM2-210ENST00000547019 CUL5Q93034 780 aa11.19□□□□□ -0.62
R3HDM2-210ENST00000547019 RNF216Q9NWF9 866 aaPredicted RBP11.19□□□□□ -0.62
R3HDM2-210ENST00000547019 ERAP1Q9NZ08 941 aa11.19□□□□□ -0.62
R3HDM2-210ENST00000547019 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
R3HDM2-210ENST00000547019 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
R3HDM2-210ENST00000547019 FASNP49327 2511 aaKnown RBP11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 STK36Q9NRP7 1315 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 WDFY3Q8IZQ1 3526 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 PFKFB2O60825 505 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 CDKL5O76039 1030 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SSRP1Q08945 709 aaKnown RBP11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 PLCB4Q15147 1175 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 NTRK3Q16288 839 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 KIAA0319Q5VV43 1072 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 ZC3H14Q6PJT7 736 aaKnown RBP11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SLC24A5Q71RS6 500 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 C1orf210Q8IVY1 113 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SLC39A11Q8N1S5 342 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SLC22A17Q8WUG5 538 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 SENP7Q9BQF6 1050 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 FOXQ1Q9C009 403 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 PARD6AQ9NPB6 346 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 ZFYVE26Q68DK2 2539 aa11.18□□□□□ -0.62
R3HDM2-210ENST00000547019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 DENND3A2RUS2 1198 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 NT5C1B-RDH14C9J2C7 533 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 M0QZ92 97 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 STK25O00506 426 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 ADCY7P51828 1080 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 KRT76Q01546 638 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 TBC1D8BQ0IIM8 1120 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 DSC3Q14574 896 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 ME3Q16798 604 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 CLLU1OSQ5K130 101 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 ATAT1Q5SQI0 421 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 VARS2Q5ST30 1063 aaKnown RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 CCDC149Q6ZUS6 474 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 FAM228AQ86W67 206 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 CCDC148Q8NFR7 591 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 BCL7CQ8WUZ0 217 aaPredicted RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 ZNF558Q96NG5 402 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 ZBP1Q9H171 429 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 TMEM161AQ9NX61 479 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 BARHL2Q9NY43 387 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 SPG21Q9NZD8 308 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 PKD2L1Q9P0L9 805 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 WNT16Q9UBV4 365 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 PUF60Q9UHX1 559 aaKnown RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 CDV3Q9UKY7 258 aaKnown RBP11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 ST3GAL5Q9UNP4 418 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 PCDHA2Q9Y5H9 948 aa11.17□□□□□ -0.62
R3HDM2-210ENST00000547019 STAM2O75886 525 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 DEXIO95424 95 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 ITGB5P18084 799 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 CA8P35219 290 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 PPM1AP35813 382 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 FAM189BP81408 668 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 UBE2SQ16763 222 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 GPR149Q86SP6 731 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 ST13P5Q8NFI4 369 aaPredicted RBP11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 GPR152Q8TDT2 470 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 GLG1Q92896 1179 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 VN1R3Q9BXE9 311 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 DZANK1Q9NVP4 752 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 VPS54Q9P1Q0 977 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 NCDNQ9UBB6 729 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 LIMCH1Q9UPQ0 1083 aa11.16□□□□□ -0.62
R3HDM2-210ENST00000547019 RALGAPA1Q6GYQ0 2036 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 SMIM35A0A1B0GVV1 85 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 ESYT2A0FGR8 921 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 RRN3P2A6NIE6 340 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 SPDYE3A6NKU9 549 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 KINO60870 393 aaKnown RBP11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 ST3GAL1Q11201 340 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 MTHFD1LQ6UB35 978 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 OTOP3Q7RTS5 596 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 PJA1Q8NG27 643 aa11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 ACSF2Q96CM8 615 aaPredicted RBP11.15□□□□□ -0.62
R3HDM2-210ENST00000547019 ELAC1Q9H777 363 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms