RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 EPHA7Q15375 998 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 CLUL1Q15846 466 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 EARS2Q5JPH6 523 aaKnown RBP16.12■□□□□ 0.17
COL2A1-209ENST00000546974 TMEM31Q5JXX7 168 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 ZNF598Q86UK7 904 aaKnown RBP16.12■□□□□ 0.17
COL2A1-209ENST00000546974 ADHFE1Q8IWW8 467 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 EXOC8Q8IYI6 725 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 SLFN12Q8IYM2 578 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 LRRC43Q8N309 656 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 NECAB1Q8N987 351 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 MICAL1Q8TDZ2 1067 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 MSLNLQ96KJ4 702 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 FDXACB1Q9BRP7 624 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-209ENST00000546974 LRFN3Q9BTN0 628 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 BRMS1Q9HCU9 246 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 CYP26B1Q9NR63 512 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 FSD2A1L4K1 749 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 FSCN2O14926 492 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 BAG4O95429 457 aaKnown RBP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 EYA4O95677 639 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 ALADP13716 330 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 ERVFC1P60507 584 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 NR5A1Q13285 461 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 PLA2G4FQ68DD2 849 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 RBM23Q86U06 439 aaKnown RBP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 C4orf19Q8IY42 314 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 NSUN7Q8NE18 718 aaKnown RBP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 MRPS27Q92552 414 aaKnown RBP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 TNFRSF25Q93038 417 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 CDCA3Q99618 268 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 TLE6Q9H808 572 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
COL2A1-209ENST00000546974 PUF60Q9UHX1 559 aaKnown RBP16.11■□□□□ 0.17
COL2A1-209ENST00000546974 LARGE1O95461 756 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 SKIP12755 728 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 ATF7P17544 494 aaPredicted RBP16.1■□□□□ 0.17
COL2A1-209ENST00000546974 PPM1AP35813 382 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 PHKA2P46019 1235 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 NEK4P51957 841 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 NPEPPSP55786 919 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 COASYQ13057 564 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 KCNT2Q6UVM3 1135 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 RNF169Q8NCN4 708 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 SLC7A3Q8WY07 619 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 RSPH1Q8WYR4 309 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 CEP170P1Q96L14 293 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 ZNF558Q96NG5 402 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 POP1Q99575 1024 aaKnown RBP16.1■□□□□ 0.17
COL2A1-209ENST00000546974 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
COL2A1-209ENST00000546974 C11orf16Q9NQ32 467 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 WRAP73Q9P2S5 460 aaPredicted RBP16.1■□□□□ 0.17
COL2A1-209ENST00000546974 RAPGEFL1Q9UHV5 662 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 PCDHGC5Q9Y5F6 944 aa16.1■□□□□ 0.17
COL2A1-209ENST00000546974 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 GLP2RO95838 553 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 RFC5P40937 340 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 KRT17Q04695 432 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 SPIRE1Q08AE8 756 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 DUSP6Q16828 381 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 NCAPH2Q6IBW4 605 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 OTUD6AQ7L8S5 288 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 KSR1Q8IVT5 923 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
COL2A1-209ENST00000546974 SMRP1Q8NCR6 262 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 HELQQ8TDG4 1101 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 LXNQ9BS40 222 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 MRPL9Q9BYD2 267 aaKnown RBP16.09■□□□□ 0.17
COL2A1-209ENST00000546974 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 NGRNQ9NPE2 291 aaKnown RBP16.09■□□□□ 0.17
COL2A1-209ENST00000546974 COL4A3BPQ9Y5P4 624 aa16.09■□□□□ 0.17
COL2A1-209ENST00000546974 ARID2Q68CP9 1835 aa16.08■□□□□ 0.17
COL2A1-209ENST00000546974 PER2O15055 1255 aa16.08■□□□□ 0.16
COL2A1-209ENST00000546974 GAS2O43903 313 aaKnown RBP16.08■□□□□ 0.16
COL2A1-209ENST00000546974 YWHABP31946 246 aaKnown RBP16.08■□□□□ 0.16
COL2A1-209ENST00000546974 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.16
COL2A1-209ENST00000546974 TWF2Q6IBS0 349 aaKnown RBP16.08■□□□□ 0.16
COL2A1-209ENST00000546974 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.16
COL2A1-209ENST00000546974 PSPC1Q8WXF1 523 aaKnown RBP16.08■□□□□ 0.16
COL2A1-209ENST00000546974 DYDC2Q96IM9 177 aa16.08■□□□□ 0.16
COL2A1-209ENST00000546974 IFT122Q9HBG6 1241 aa16.08■□□□□ 0.16
COL2A1-209ENST00000546974 SPG21Q9NZD8 308 aa16.08■□□□□ 0.16
COL2A1-209ENST00000546974 RGL1Q9NZL6 768 aa16.08■□□□□ 0.16
COL2A1-209ENST00000546974 PIN4Q9Y237 131 aaKnown RBP16.08■□□□□ 0.16
COL2A1-209ENST00000546974 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 ASAP2O43150 1006 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 DCXO43602 365 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 JAK2O60674 1132 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 ZNF623O75123 536 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 SLITRK3O94933 977 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 RAB27AP51159 221 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 TRIM29Q14134 588 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 CTTNQ14247 550 aaKnown RBP16.07■□□□□ 0.16
COL2A1-209ENST00000546974 PLPP4Q5VZY2 271 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms