RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
DDX54-203ENST00000546869 MYH15Q9Y2K3 1946 aa16.05■□□□□ 0.16
DDX54-203ENST00000546869 TET1Q8NFU7 2136 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 AMHP03971 560 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 SRGAP2CP0DJJ0 459 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX54-203ENST00000546869 PHKA2P46019 1235 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 NFX1Q12986 1120 aaKnown RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 CAPSQ13938 189 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 DSC3Q14574 896 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 PPP2R5AQ15172 486 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 RRAGBQ5VZM2 374 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 SHC4Q6S5L8 630 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 RTN4RL1Q86UN2 441 aaPredicted RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 RASSF8Q8NHQ8 419 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 LARP4BQ92615 738 aaKnown RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 TOP1MTQ969P6 601 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 SCLT1Q96NL6 688 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 PPP1R16BQ96T49 567 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 PLIN2Q99541 437 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 NTPCRQ9BSD7 190 aaKnown RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 TRAIPQ9BWF2 469 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
DDX54-203ENST00000546869 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 RANBP2P49792 3224 aaKnown RBP16.04■□□□□ 0.16
DDX54-203ENST00000546869 SIP14410 1827 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 ARID2Q68CP9 1835 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 NAMPTP43490 491 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 FAM189BP81408 668 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 ARSHQ5FYA8 562 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 CDCA2Q69YH5 1023 aaPredicted RBP16.03■□□□□ 0.16
DDX54-203ENST00000546869 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
DDX54-203ENST00000546869 RUSC1Q9BVN2 902 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 GPRC5CQ9NQ84 441 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 C1orf112Q9NSG2 853 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 ODF2LQ9ULJ1 636 aa16.03■□□□□ 0.16
DDX54-203ENST00000546869 HIP1RO75146 1068 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 GJB5O95377 273 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.16
DDX54-203ENST00000546869 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
DDX54-203ENST00000546869 CMA1P23946 247 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 AXLP30530 894 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 MAPK7Q13164 816 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 E2F4Q16254 413 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.02■□□□□ 0.16
DDX54-203ENST00000546869 SLC24A5Q71RS6 500 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 MAEAQ7L5Y9 396 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 DAW1Q8N136 415 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 LINC01599Q8WXQ3 324 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 KCNN1Q92952 543 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 ZNF668Q96K58 619 aaPredicted RBP16.02■□□□□ 0.16
DDX54-203ENST00000546869 IFT74Q96LB3 600 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 C2orf40Q9H1Z8 148 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 PCDHA11Q9Y5I1 949 aa16.02■□□□□ 0.16
DDX54-203ENST00000546869 LOXHD1Q8IVV2 1947 aa16.02■□□□□ 0.15
DDX54-203ENST00000546869 PHLPP2Q6ZVD8 1323 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 A0A087X0B3 334 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 FAM237AA0A1B0GTK4 181 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 A0A1W2PQ27 194 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 A0A1W2PQ64 194 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 A0A1W2PQD8 194 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
DDX54-203ENST00000546869 SCP2P22307 547 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 EFNA5P52803 228 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 DEFB103AP81534 67 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 MCM6Q14566 821 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 RAB30Q15771 203 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 FAM187BQ17R55 369 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 FAM109BQ6ICB4 259 aaPredicted RBP16.01■□□□□ 0.15
DDX54-203ENST00000546869 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 SV2BQ7L1I2 683 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 IQUBQ8NA54 791 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 SPIRE2Q8WWL2 714 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 ADAM2Q99965 735 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 LRRC27Q9C0I9 530 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 FZD8Q9H461 694 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
DDX54-203ENST00000546869 DACT1Q9NYF0 836 aa16.01■□□□□ 0.15
DDX54-203ENST00000546869 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
DDX54-203ENST00000546869 TMEM265A0A087WTH1 108 aa16■□□□□ 0.15
DDX54-203ENST00000546869 DENND3A2RUS2 1198 aa16■□□□□ 0.15
DDX54-203ENST00000546869 C9IYK1 514 aa16■□□□□ 0.15
DDX54-203ENST00000546869 SOX1O00570 391 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms