RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 MTCL1Q9Y4B5 1905 aaKnown RBP12.31□□□□□ -0.44
TMEM116-203ENST00000546537 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 SLC30A4O14863 429 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 TBC1D4O60343 1298 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 LILRB3O75022 631 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 GALTP07902 379 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 SDSP20132 328 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 EIF4BP23588 611 aaKnown RBP12.3□□□□□ -0.44
TMEM116-203ENST00000546537 ACAP1Q15027 740 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 MXRA8Q9BRK3 442 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
TMEM116-203ENST00000546537 DSCC1Q9BVC3 393 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 NRDE2Q9H7Z3 1164 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 MAN1C1Q9NR34 630 aa12.3□□□□□ -0.44
TMEM116-203ENST00000546537 WDR81Q562E7 1941 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 SPDYE3A6NKU9 549 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 LAMP2P13473 410 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 ATP4AP20648 1035 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 NLRP11P59045 1033 aaKnown RBP12.29□□□□□ -0.44
TMEM116-203ENST00000546537 DMWDQ09019 674 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 ITGB3BPQ13352 177 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-203ENST00000546537 HTR4Q13639 388 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 ABHD15Q6UXT9 468 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 CCDC60Q8IWA6 550 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-203ENST00000546537 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 NETO1Q8TDF5 533 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 RILPL2Q969X0 211 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
TMEM116-203ENST00000546537 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 ADAMTS10Q9H324 1103 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 PSTPIP2Q9H939 334 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 SH2B1Q9NRF2 756 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-203ENST00000546537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM116-203ENST00000546537 STK39Q9UEW8 545 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 PCDHB15Q9Y5E8 787 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
TMEM116-203ENST00000546537 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 BACH1O14867 736 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 INPPL1O15357 1258 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 PAPLNO95428 1278 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
TMEM116-203ENST00000546537 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 MAGEA9P43362 315 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 UBE2SQ16763 222 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 ANKRD45Q5TZF3 282 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
TMEM116-203ENST00000546537 AGO4Q9HCK5 861 aaKnown RBP12.28□□□□□ -0.44
TMEM116-203ENST00000546537 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 TBC1D13Q9NVG8 400 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 DNAJB4Q9UDY4 337 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 SEC63Q9UGP8 760 aaKnown RBP12.28□□□□□ -0.44
TMEM116-203ENST00000546537 DPP7Q9UHL4 492 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 ANGPTL2Q9UKU9 493 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 MTF2Q9Y483 593 aaPredicted RBP12.28□□□□□ -0.44
TMEM116-203ENST00000546537 NUMBLQ9Y6R0 609 aa12.28□□□□□ -0.44
TMEM116-203ENST00000546537 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 CCNE2O96020 404 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 SSBP05455 408 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 SLC11A1P49279 550 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 CLCN3P51790 818 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 GPC5P78333 572 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 SPEM2Q0P670 501 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 CWC27Q6UX04 472 aaKnown RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 LINC01465Q8N7H1 131 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 SMG7Q92540 1137 aaKnown RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 ZNF707Q96C28 371 aaPredicted RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 MRPL17Q9NRX2 175 aaKnown RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 AKT3Q9Y243 479 aa12.27□□□□□ -0.45
TMEM116-203ENST00000546537 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.27□□□□□ -0.45
TMEM116-203ENST00000546537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.26□□□□□ -0.45
TMEM116-203ENST00000546537 ERICH2A1L162 156 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 FAM170BA6NMN3 283 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 RFPL2O75678 378 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 DARSP14868 501 aaKnown RBP12.26□□□□□ -0.45
TMEM116-203ENST00000546537 FGFR4P22455 802 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 PMLP29590 882 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 PHKA2P46019 1235 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 PRKCQQ04759 706 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 UBXN2BQ14CS0 331 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 MLF2Q15773 248 aaPredicted RBP12.26□□□□□ -0.45
TMEM116-203ENST00000546537 NOMO2Q5JPE7 1267 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 SWSAP1Q6NVH7 229 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 ELMSAN1Q6PJG2 1045 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 TSSK4Q6SA08 328 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 GET4Q7L5D6 327 aaPredicted RBP12.26□□□□□ -0.45
TMEM116-203ENST00000546537 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
TMEM116-203ENST00000546537 MAP7D2Q96T17 732 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms