RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 GPR101Q96P66 508 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ADPGKQ9BRR6 497 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 MYMKA6NI61 221 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CAPN9O14815 690 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ACTN1P12814 892 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 FGFR4P22455 802 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 SEC24CP53992 1094 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 SPATA21Q7Z572 469 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 OR2W6PQ8NHA6 318 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 TRIM51Q9BSJ1 452 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 EPS15L1Q9UBC2 864 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 PPARGC1AQ9UBK2 798 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 SPECC1L-ADORA2AF8WAN1 911 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ECE1P42892 770 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 VAMP7P51809 220 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 TRIM65Q6PJ69 517 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CRLF3Q8IUI8 442 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 LRRN4CLQ8ND94 238 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 AGXT2Q9BYV1 514 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ISCUQ9H1K1 167 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 COPEO14579 308 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 SPAG7O75391 227 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 CD58P19256 250 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 NSUN4Q96CB9 384 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 LRGUKQ96M69 825 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 HNRNPH1P31943 449 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 USP11P51784 963 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 KLHL38Q2WGJ6 581 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 CAPRIN2Q6IMN6 1127 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 DYDC2Q96IM9 177 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 CXorf56Q9H5V9 222 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 ANKZF1Q9H8Y5 726 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 TCP11X1B4DZS4 312 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 PDHA1P08559 390 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 TRIM49P0CI25 452 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 TRIM49CP0CI26 452 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 UCHL3P15374 230 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 KCNQ4P56696 695 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 CDR2Q01850 454 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 PCGF5Q86SE9 256 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 CYTH2Q99418 400 aa13.07□□□□□ -0.32
NPC1L1-204ENST00000546276 GALCP54803 685 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 ERICH1Q86X53 443 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 SPDL1Q96EA4 605 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 ELF1P32519 619 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 RAD23BP54727 409 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 TFDP1Q14186 410 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 KDM7AQ6ZMT4 941 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 RAPH1Q70E73 1250 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 C1orf54Q8WWF1 131 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 PLAGL2Q9UPG8 496 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 ZNF18P17022 549 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 QRICH1Q2TAL8 776 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 CDKAL1Q5VV42 579 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 SYN2Q92777 582 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 CDHR1Q96JP9 859 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 NXF1Q9UBU9 619 aaKnown RBP13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 PRPSAP2O60256 369 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 PSMA2P25787 234 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 TOB1P50616 345 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 KRT17Q04695 432 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 LRRC23Q53EV4 343 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 NUDCD1Q96RS6 583 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 C11orf70Q9BRQ4 267 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 TRAIPQ9BWF2 469 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 ZWILCHQ9H900 591 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 DBNDD1Q9H9R9 158 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 KCND1Q9NSA2 647 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 DCTN4Q9UJW0 460 aa13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 TTC7AQ9ULT0 858 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-204ENST00000546276 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 PHF2O75151 1096 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 ZBED1O96006 694 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 GSTA1P08263 222 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 GSTA2P09210 222 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms