RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 PIAS1O75925 651 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 GNA14O95837 355 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 ADCY8P40145 1251 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 ACOT2P49753 483 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 MXI1P50539 228 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 SMTNP53814 917 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 KCNMA1Q12791 1236 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 SLC18A3Q16572 532 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 RPUSD2Q8IZ73 545 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 DHX38Q92620 1227 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 ATP6V1G3Q96LB4 118 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 EPN3Q9H201 632 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 PRM3Q9NNZ6 103 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 NXF1Q9UBU9 619 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 A0A1W2PQJ5 194 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 WDR91A4D1P6 747 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 ZNF233A6NK53 670 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 NFIBO00712 420 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 CTNND1O60716 968 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 SRGAP2CP0DJJ0 459 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 GCFC2P16383 781 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 CASKIN2Q8WXE0 1202 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 IQCDQ96DY2 449 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 MAGEF1Q9HAY2 307 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 DAAM1Q9Y4D1 1078 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 FOXN3O00409 490 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 RGS16O15492 202 aaPredicted RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 CSDE1O75534 798 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 KIF4AO95239 1232 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 BSPRYQ5W0U4 402 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 DEFB132Q7Z7B7 95 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 SLC35G2Q8TBE7 412 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 TAS2R14Q9NYV8 317 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 MRPL11Q9Y3B7 192 aaKnown RBP10.57□□□□□ -0.72
TRAF1-203ENST00000546084 KCPQ6ZWJ8 1503 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 PHF20L1A8MW92 1017 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 CLTAP09496 248 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 MDH1P40925 334 aaKnown RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 GIT2Q14161 759 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 GLE1Q53GS7 698 aaKnown RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 DENND2CQ68D51 928 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 DCUN1D2Q6PH85 259 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 RNF25Q96BH1 459 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 RIOX1Q9H6W3 641 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 SUDS3Q9H7L9 328 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 GRIN2DO15399 1336 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 CNTNAP4Q9C0A0 1308 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 RPSAP08865 295 aaKnown RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 PON1P27169 355 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 FIGNQ5HY92 759 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 CEP120Q8N960 986 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 CPA5Q8WXQ8 436 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 NACC1Q96RE7 527 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 SH3GL2Q99962 352 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 SIK3Q9Y2K2 1263 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 SIPA1L3O60292 1781 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 PRLRP16471 622 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 LIG4P49917 911 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 MTMR1Q13613 665 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 PDIA5Q14554 519 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 RINT1Q6NUQ1 792 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 SWSAP1Q6NVH7 229 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 LLGL2Q6P1M3 1020 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 ZNF365Q70YC5 407 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 RNF10Q8N5U6 811 aaKnown RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 UBL4BQ8N7F7 174 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 WHAMMQ8TF30 809 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 TCP11Q8WWU5 503 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 ATG4AQ8WYN0 398 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 ANKS1AQ92625 1134 aa10.56□□□□□ -0.72
TRAF1-203ENST00000546084 DBR1Q9UK59 544 aaKnown RBP10.56□□□□□ -0.72
TRAF1-203ENST00000546084 GJB6O95452 261 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 CDK17Q00537 523 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 PTGISQ16647 500 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 WDR44Q5JSH3 913 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 RUFY4Q6ZNE9 571 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 PODNQ7Z5L7 613 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 ANKRD35Q8N283 1001 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 MYCBPAPQ8TBZ2 947 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 C11orf70Q9BRQ4 267 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 KMT5AQ9NQR1 393 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 PICK1Q9NRD5 415 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 STK32BQ9NY57 414 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 RNF14Q9UBS8 474 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 MTRF1LQ9UGC7 380 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 RASAL2Q9UJF2 1139 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 NAGPAQ9UK23 515 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 SYNJ2BP-COX16A0A087WUM0 186 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms