RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 WRAP73Q9P2S5 460 aaPredicted RBP25.46■■□□□ 1.67
CHD4-214ENST00000545942 ATG2AQ2TAZ0 1938 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 FNDC1Q4ZHG4 1894 aaPredicted RBP25.45■■□□□ 1.67
CHD4-214ENST00000545942 JAK2O60674 1132 aa25.45■■□□□ 1.66
CHD4-214ENST00000545942 EOMESO95936 686 aa25.45■■□□□ 1.66
CHD4-214ENST00000545942 SPIRE1Q08AE8 756 aa25.45■■□□□ 1.66
CHD4-214ENST00000545942 ADAM15Q13444 863 aa25.45■■□□□ 1.66
CHD4-214ENST00000545942 EPHX3Q9H6B9 360 aa25.45■■□□□ 1.66
CHD4-214ENST00000545942 TLR9Q9NR96 1032 aa25.45■■□□□ 1.66
CHD4-214ENST00000545942 BTBD18B2RXH4 712 aa25.44■■□□□ 1.66
CHD4-214ENST00000545942 LINC01565O15544 149 aa25.44■■□□□ 1.66
CHD4-214ENST00000545942 TBX10O75333 385 aa25.44■■□□□ 1.66
CHD4-214ENST00000545942 SSTR3P32745 418 aaPredicted RBP25.44■■□□□ 1.66
CHD4-214ENST00000545942 POLGP54098 1239 aaPredicted RBP25.44■■□□□ 1.66
CHD4-214ENST00000545942 ZNF598Q86UK7 904 aaKnown RBP25.44■■□□□ 1.66
CHD4-214ENST00000545942 DIS3L2Q8IYB7 885 aaKnown RBP25.44■■□□□ 1.66
CHD4-214ENST00000545942 MICAL1Q8TDZ2 1067 aa25.44■■□□□ 1.66
CHD4-214ENST00000545942 NLRP4Q96MN2 994 aa25.44■■□□□ 1.66
CHD4-214ENST00000545942 RGL1Q9NZL6 768 aa25.44■■□□□ 1.66
CHD4-214ENST00000545942 COL9A1P20849 921 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 YWHABP31946 246 aaKnown RBP25.43■■□□□ 1.66
CHD4-214ENST00000545942 RFC5P40937 340 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 NRIP1P48552 1158 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 NDUFV1P49821 464 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 CLUL1Q15846 466 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 CLLU1OSQ5K130 101 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 LRRC55Q6ZSA7 311 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 OTUD6AQ7L8S5 288 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 KSR1Q8IVT5 923 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 EFHBQ8N7U6 833 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 ZNF579Q8NAF0 562 aaKnown RBP25.43■■□□□ 1.66
CHD4-214ENST00000545942 KHSRPQ92945 711 aaKnown RBP eCLIP25.43■■□□□ 1.66
CHD4-214ENST00000545942 DYDC2Q96IM9 177 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 TRAIPQ9BWF2 469 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 DHX33Q9H6R0 707 aaKnown RBP25.43■■□□□ 1.66
CHD4-214ENST00000545942 ZSWIM4Q9H7M6 989 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 PRKAG3Q9UGI9 489 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 LZTS1Q9Y250 596 aa25.43■■□□□ 1.66
CHD4-214ENST00000545942 ATF7P17544 494 aaPredicted RBP25.42■■□□□ 1.66
CHD4-214ENST00000545942 PLCB3Q01970 1234 aa25.42■■□□□ 1.66
CHD4-214ENST00000545942 PDE12Q6L8Q7 609 aaKnown RBP25.42■■□□□ 1.66
CHD4-214ENST00000545942 RBM23Q86U06 439 aaKnown RBP25.42■■□□□ 1.66
CHD4-214ENST00000545942 ZNF558Q96NG5 402 aa25.42■■□□□ 1.66
CHD4-214ENST00000545942 PUF60Q9UHX1 559 aaKnown RBP25.42■■□□□ 1.66
CHD4-214ENST00000545942 PCDHA12Q9UN75 941 aa25.42■■□□□ 1.66
CHD4-214ENST00000545942 PIN4Q9Y237 131 aaKnown RBP25.42■■□□□ 1.66
CHD4-214ENST00000545942 PCDHGC5Q9Y5F6 944 aa25.42■■□□□ 1.66
CHD4-214ENST00000545942 COL4A3BPQ9Y5P4 624 aa25.42■■□□□ 1.66
CHD4-214ENST00000545942 PPM1AP35813 382 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 PHKA2P46019 1235 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 FOSBP53539 338 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 CYP4A11Q02928 519 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 ST3GAL1Q11201 340 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 SMAD4Q13485 552 aaKnown RBP25.41■■□□□ 1.66
CHD4-214ENST00000545942 CTTNQ14247 550 aaKnown RBP25.41■■□□□ 1.66
CHD4-214ENST00000545942 SMAD2Q15796 467 aaKnown RBP25.41■■□□□ 1.66
CHD4-214ENST00000545942 CALCRLQ16602 461 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 TWF2Q6IBS0 349 aaKnown RBP25.41■■□□□ 1.66
CHD4-214ENST00000545942 KCNT2Q6UVM3 1135 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 CATSPER4Q7RTX7 472 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 PSPC1Q8WXF1 523 aaKnown RBP25.41■■□□□ 1.66
CHD4-214ENST00000545942 MRPS27Q92552 414 aaKnown RBP25.41■■□□□ 1.66
CHD4-214ENST00000545942 TLE6Q9H808 572 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 IFT122Q9HBG6 1241 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 CD207Q9UJ71 328 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 LIMCH1Q9UPQ0 1083 aa25.41■■□□□ 1.66
CHD4-214ENST00000545942 PI4K2BG5E9Z4 385 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 MBTPS2O43462 519 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 GAS2O43903 313 aaKnown RBP25.4■■□□□ 1.66
CHD4-214ENST00000545942 NEMFO60524 1076 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 ZP2Q05996 745 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 TPH2Q8IWU9 490 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 ADHFE1Q8IWW8 467 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 HELQQ8TDG4 1101 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 RSPH1Q8WYR4 309 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 TMEM143Q96AN5 459 aa25.4■■□□□ 1.66
CHD4-214ENST00000545942 MRPL9Q9BYD2 267 aaKnown RBP25.4■■□□□ 1.66
CHD4-214ENST00000545942 PLXNA4Q9HCM2 1894 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 FSD2A1L4K1 749 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 SLITRK3O94933 977 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 SKIP12755 728 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 ERVFC1P60507 584 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 EMC2Q15006 297 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 XKR9Q5GH70 373 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 TCP11Q8WWU5 503 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 PRPF31Q8WWY3 499 aaKnown RBP25.39■■□□□ 1.66
CHD4-214ENST00000545942 MSLNLQ96KJ4 702 aa25.39■■□□□ 1.66
CHD4-214ENST00000545942 EIF2AK1Q9BQI3 630 aaKnown RBP25.39■■□□□ 1.66
CHD4-214ENST00000545942 TTC12Q9H892 705 aaPredicted RBP25.39■■□□□ 1.66
CHD4-214ENST00000545942 FSCN2O14926 492 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 PBX3P40426 434 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 RAB27AP51159 221 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 KRT17Q04695 432 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 SRGAP1Q7Z6B7 1085 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 CDCA3Q99618 268 aaPredicted RBP25.38■■□□□ 1.65
CHD4-214ENST00000545942 BMP2KQ9NSY1 1161 aaPredicted RBP25.38■■□□□ 1.65
CHD4-214ENST00000545942 FAM105AQ9NUU6 356 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 SPG21Q9NZD8 308 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 CLEC1BQ9P126 229 aa25.38■■□□□ 1.65
CHD4-214ENST00000545942 ZBTB39O15060 712 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms