RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 KIAA1841Q6NSI8 718 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 ZBTB33Q86T24 672 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 TMEM173Q86WV6 379 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-225ENST00000545934 RNF169Q8NCN4 708 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 RSPH1Q8WYR4 309 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 ATOH1Q92858 354 aaPredicted RBP18.82■□□□□ 0.6
CPSF7-225ENST00000545934 KCNB2Q92953 911 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 ZBP1Q9H171 429 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 CHST12Q9NRB3 414 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 DACT1Q9NYF0 836 aa18.82■□□□□ 0.6
CPSF7-225ENST00000545934 TDRD15B5MCY1 1934 aaKnown RBP18.81■□□□□ 0.6
CPSF7-225ENST00000545934 IGKV6-21A0A0C4DH24 114 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 NT5C1B-RDH14C9J2C7 533 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 SFNP31947 248 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 NTRK3Q16288 839 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 B3GNT9Q6UX72 402 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 ZDHHC14Q8IZN3 488 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 FBXL16Q8N461 479 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 TMEM105Q8N8V8 129 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 SLC22A17Q8WUG5 538 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 NIFKQ9BYG3 293 aaKnown RBP18.81■□□□□ 0.6
CPSF7-225ENST00000545934 UNC45AQ9H3U1 944 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 SMOC2Q9H3U7 446 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 DZANK1Q9NVP4 752 aa18.81■□□□□ 0.6
CPSF7-225ENST00000545934 H0Y858 1186 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 CXCL14O95715 111 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 CPA1P15085 419 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 PHKA2P46019 1235 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 ALDH7A1P49419 539 aaKnown RBP18.8■□□□□ 0.6
CPSF7-225ENST00000545934 USP11P51784 963 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 JAK3P52333 1124 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 POLGP54098 1239 aaPredicted RBP18.8■□□□□ 0.6
CPSF7-225ENST00000545934 TBC1D8BQ0IIM8 1120 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 BICD2Q8TD16 824 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 NLRP7Q8WX94 980 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 TMEM169Q96HH4 297 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 USTQ9Y2C2 406 aa18.8■□□□□ 0.6
CPSF7-225ENST00000545934 CSDE1O75534 798 aaKnown RBP18.79■□□□□ 0.6
CPSF7-225ENST00000545934 WEE2P0C1S8 567 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 CTSAP10619 480 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 CDC42EP1Q00587 391 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 GIT2Q14161 759 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 RARS2Q5T160 578 aaKnown RBP18.79■□□□□ 0.6
CPSF7-225ENST00000545934 KANK3Q6NY19 840 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 Q6ZUG5 572 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 DDX53Q86TM3 631 aaKnown RBP18.79■□□□□ 0.6
CPSF7-225ENST00000545934 VPS52Q8N1B4 723 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 C12orf76Q8N812 135 aaPredicted RBP18.79■□□□□ 0.6
CPSF7-225ENST00000545934 RDM1Q8NG50 284 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 FEZF2Q8TBJ5 459 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 BCL7CQ8WUZ0 217 aaPredicted RBP18.79■□□□□ 0.6
CPSF7-225ENST00000545934 PHKBQ93100 1093 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 IGSF21Q96ID5 467 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 TEKT3Q9BXF9 490 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 RNF26Q9BY78 433 aaPredicted RBP18.79■□□□□ 0.6
CPSF7-225ENST00000545934 AGXT2Q9BYV1 514 aa18.79■□□□□ 0.6
CPSF7-225ENST00000545934 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.78■□□□□ 0.6
CPSF7-225ENST00000545934 CARNS1A5YM72 827 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 GAS7O60861 476 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 PSMD10O75832 226 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 EPCAMP16422 314 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 NBL1P41271 181 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 BMS1Q14692 1282 aaKnown RBP18.78■□□□□ 0.6
CPSF7-225ENST00000545934 LRCH2Q5VUJ6 765 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 TDRD5Q8NAT2 981 aaKnown RBP18.78■□□□□ 0.6
CPSF7-225ENST00000545934 CCDC148Q8NFR7 591 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 BRF1Q92994 677 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 CCDC136Q96JN2 1154 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 VN1R3Q9BXE9 311 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 GCOM2Q9BZD3 368 aaPredicted RBP18.78■□□□□ 0.6
CPSF7-225ENST00000545934 NRDE2Q9H7Z3 1164 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 TBC1D13Q9NVG8 400 aa18.78■□□□□ 0.6
CPSF7-225ENST00000545934 NAP1L2Q9ULW6 460 aaPredicted RBP18.78■□□□□ 0.6
CPSF7-225ENST00000545934 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 ZFHX2Q9C0A1 2572 aaPredicted RBP18.77■□□□□ 0.6
CPSF7-225ENST00000545934 A0A087WZ62 844 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 MEIS3P2A8K0S8 358 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 CHMP2AO43633 222 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 ZNF623O75123 536 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 ASGR2P07307 311 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 GALTP07902 379 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 Q4G0T1 1027 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 XKR3Q5GH77 459 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 ATAT1Q5SQI0 421 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 ASCL5Q7RTU5 278 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 ZNF410Q86VK4 478 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 PLCD3Q8N3E9 789 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 LPPQ93052 612 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 GJA10Q969M2 543 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 SCLT1Q96NL6 688 aa18.77■□□□□ 0.6
CPSF7-225ENST00000545934 FDXACB1Q9BRP7 624 aaPredicted RBP18.77■□□□□ 0.6
CPSF7-225ENST00000545934 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.59
CPSF7-225ENST00000545934 CYP3A7-CYP3A51PA0A087WV96 503 aa18.76■□□□□ 0.59
CPSF7-225ENST00000545934 TMEM150BA6NC51 233 aa18.76■□□□□ 0.59
CPSF7-225ENST00000545934 B4GALT3O60512 393 aa18.76■□□□□ 0.59
CPSF7-225ENST00000545934 ZC3H11AO75152 810 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPSF7-225ENST00000545934 OFD1O75665 1012 aa18.76■□□□□ 0.59
CPSF7-225ENST00000545934 SKIP12755 728 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms