RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 WDR46O15213 610 aaKnown RBP9.26□□□□□ -0.93
CLIP1-218ENST00000545889 CLDN3O15551 220 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 TDP2O95551 362 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 KCNA3P22001 575 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 LONP1P36776 959 aaKnown RBP9.26□□□□□ -0.93
CLIP1-218ENST00000545889 ARL4AP40617 200 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 NTRK3Q16288 839 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 ATG4CQ96DT6 458 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 SH3GL3Q99963 347 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 SYNDIG1Q9H7V2 258 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 ATP8B1O43520 1251 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 MFAP3P55082 362 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 PRPSAP1Q14558 356 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 SCYL3Q8IZE3 742 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 FAM76AQ8TAV0 307 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 SPDL1Q96EA4 605 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 EEF2KMTQ96G04 330 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 ZNF668Q96K58 619 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-218ENST00000545889 HINFPQ9BQA5 517 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 KATNAL1Q9BW62 490 aa9.26□□□□□ -0.93
CLIP1-218ENST00000545889 H7C0C1 242 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 THAP12O43422 761 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 CD58P19256 250 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ATP5OP48047 213 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 TRAPPC10P48553 1259 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 DGKZQ13574 1117 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 OR6B2Q6IFH4 312 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ARRDC4Q8NCT1 418 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 LRRN4CLQ8ND94 238 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 PPP1R13BQ96KQ4 1090 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 PARVGQ9HBI0 331 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 MYO1FO00160 1098 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 LAD1O00515 517 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 NR2F2P24468 414 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 RANBP1P43487 201 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 GTF2A2P52657 109 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 RPS6KA1Q15418 735 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ZNF667Q5HYK9 610 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 KCNV1Q6PIU1 500 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ZBTB10Q96DT7 871 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 HEXIM2Q96MH2 286 aaKnown RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 STRIP2Q9ULQ0 834 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 PP2D1A8MPX8 630 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ARHGAP4P98171 946 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 CACNB1Q02641 598 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 TNFAIP2Q03169 654 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 CYP26C1Q6V0L0 522 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ILDR2Q71H61 639 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 SH3BP5LQ7L8J4 393 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 RHPN2Q8IUC4 686 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 BEST2Q8NFU1 509 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 UBLCP1Q8WVY7 318 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 RIC8AQ9NPQ8 531 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 POTEMA6NI47 508 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 COBLO75128 1261 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 H2AFXP16104 143 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ATN1P54259 1190 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-218ENST00000545889 PEX3P56589 373 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 AP3B2Q13367 1082 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ZNF568Q3ZCX4 644 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 LONRF3Q496Y0 759 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 RINT1Q6NUQ1 792 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ARMCX6Q7L4S7 300 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 SPATA24Q86W54 205 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 FAM186BQ8IYM0 893 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 CD248Q9HCU0 757 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ZNF302Q9NR11 478 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 GDAQ9Y2T3 454 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 THSD7AQ9UPZ6 1657 aa9.25□□□□□ -0.93
CLIP1-218ENST00000545889 ABCB11O95342 1321 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 CCDC85CA6NKD9 419 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 STXBP3O00186 592 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 OPA1O60313 960 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 AP1G2O75843 785 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 GSTA1P08263 222 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 GSTA2P09210 222 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 CASP1P29466 404 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 PPFIA1Q13136 1202 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 EXOC3L4Q17RC7 722 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 ARFGAP2Q8N6H7 521 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 MTRQ99707 1265 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 PHF20Q9BVI0 1012 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 ATP6V0A4Q9HBG4 840 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 POLD4Q9HCU8 107 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SH3GLB2Q9NR46 395 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 CHUKO15111 745 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 MED7O43513 233 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 PSMC2P35998 433 aaKnown RBP9.24□□□□□ -0.93
CLIP1-218ENST00000545889 CTTNQ14247 550 aaKnown RBP9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SCARA5Q6ZMJ2 495 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SUGP1Q8IWZ8 645 aaKnown RBP9.24□□□□□ -0.93
CLIP1-218ENST00000545889 BHMT2Q9H2M3 363 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 DYRK4Q9NR20 520 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms