RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 LIMCH1Q9UPQ0 1083 aa22.25■■□□□ 1.15
CHD4-213ENST00000545584 ATG2AQ2TAZ0 1938 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 MUC3AQ02505 3323 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 YWHABP31946 246 aaKnown RBP22.24■■□□□ 1.15
CHD4-213ENST00000545584 IRS1P35568 1242 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 LTBRP36941 435 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 RFC5P40937 340 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 SAFBQ15424 915 aaKnown RBP eCLIP22.24■■□□□ 1.15
CHD4-213ENST00000545584 CALCRLQ16602 461 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 GJD3Q8N144 294 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 CASD1Q96PB1 797 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 CWH43Q9H720 699 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 TLR9Q9NR96 1032 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 RGL1Q9NZL6 768 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 PUF60Q9UHX1 559 aaKnown RBP22.24■■□□□ 1.15
CHD4-213ENST00000545584 PCDHA12Q9UN75 941 aa22.24■■□□□ 1.15
CHD4-213ENST00000545584 SKIP12755 728 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 GTF2F1P35269 517 aaKnown RBP eCLIP22.23■■□□□ 1.152e-6■□□□□ 10.8
CHD4-213ENST00000545584 NDUFV1P49821 464 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 TWF2Q6IBS0 349 aaKnown RBP22.23■■□□□ 1.15
CHD4-213ENST00000545584 PDE12Q6L8Q7 609 aaKnown RBP22.23■■□□□ 1.15
CHD4-213ENST00000545584 CATSPER4Q7RTX7 472 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 PSPC1Q8WXF1 523 aaKnown RBP22.23■■□□□ 1.15
CHD4-213ENST00000545584 DYDC2Q96IM9 177 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 ZNF558Q96NG5 402 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 DHX33Q9H6R0 707 aaKnown RBP22.23■■□□□ 1.15
CHD4-213ENST00000545584 RNF19AQ9NV58 838 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 HCSTQ9UBK5 93 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 PIN4Q9Y237 131 aaKnown RBP22.23■■□□□ 1.15
CHD4-213ENST00000545584 COL4A3BPQ9Y5P4 624 aa22.23■■□□□ 1.15
CHD4-213ENST00000545584 GAS2O43903 313 aaKnown RBP22.22■■□□□ 1.15
CHD4-213ENST00000545584 PPM1AP35813 382 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 NRIP1P48552 1158 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 CYP4A11Q02928 519 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 ADAM15Q13444 863 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 CTTNQ14247 550 aaKnown RBP22.22■■□□□ 1.15
CHD4-213ENST00000545584 CLUL1Q15846 466 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 XKR9Q5GH70 373 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 ADGRD2Q7Z7M1 963 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 KSR1Q8IVT5 923 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 TPH2Q8IWU9 490 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 EFHBQ8N7U6 833 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 TCP11Q8WWU5 503 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 MRPL9Q9BYD2 267 aaKnown RBP22.22■■□□□ 1.15
CHD4-213ENST00000545584 TLE6Q9H808 572 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 WRAP73Q9P2S5 460 aaPredicted RBP22.22■■□□□ 1.15
CHD4-213ENST00000545584 PRKAG3Q9UGI9 489 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 CD207Q9UJ71 328 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 LZTS1Q9Y250 596 aa22.22■■□□□ 1.15
CHD4-213ENST00000545584 LINC01565O15544 149 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 NEMFO60524 1076 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 PLCB3Q01970 1234 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 KRT17Q04695 432 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 DLX2Q07687 328 aaPredicted RBP22.21■■□□□ 1.15
CHD4-213ENST00000545584 SPIRE1Q08AE8 756 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 CLLU1OSQ5K130 101 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 KCNT2Q6UVM3 1135 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 LRRC55Q6ZSA7 311 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 RBM23Q86U06 439 aaKnown RBP22.21■■□□□ 1.15
CHD4-213ENST00000545584 ZNF598Q86UK7 904 aaKnown RBP22.21■■□□□ 1.15
CHD4-213ENST00000545584 ZNF579Q8NAF0 562 aaKnown RBP22.21■■□□□ 1.15
CHD4-213ENST00000545584 HELQQ8TDG4 1101 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 RSPH1Q8WYR4 309 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 TMEM143Q96AN5 459 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 TRAIPQ9BWF2 469 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 EPHX3Q9H6B9 360 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 TTC12Q9H892 705 aaPredicted RBP22.21■■□□□ 1.15
CHD4-213ENST00000545584 CD320Q9NPF0 282 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 PLXNA4Q9HCM2 1894 aa22.21■■□□□ 1.15
CHD4-213ENST00000545584 FSD2A1L4K1 749 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 ASAP2O43150 1006 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 TBX10O75333 385 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 SRGAP2CP0DJJ0 459 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 TXKP42681 527 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 PHKA2P46019 1235 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 EMC2Q15006 297 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 SRGAP1Q7Z6B7 1085 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 CCDC83Q8IWF9 413 aa22.2■■□□□ 1.14
CHD4-213ENST00000545584 PRPF31Q8WWY3 499 aaKnown RBP22.2■■□□□ 1.14
CHD4-213ENST00000545584 MRPS27Q92552 414 aaKnown RBP22.2■■□□□ 1.14
CHD4-213ENST00000545584 CCDC43Q96MW1 224 aaKnown RBP22.2■■□□□ 1.14
CHD4-213ENST00000545584 EIF2AK1Q9BQI3 630 aaKnown RBP22.2■■□□□ 1.14
CHD4-213ENST00000545584 LLPHQ9BRT6 129 aaKnown RBP22.2■■□□□ 1.14
CHD4-213ENST00000545584 BMP2KQ9NSY1 1161 aaPredicted RBP22.2■■□□□ 1.14
CHD4-213ENST00000545584 MBTPS2O43462 519 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 SLITRK3O94933 977 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 COL9A1P20849 921 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 RAB27AP51159 221 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 ST3GAL1Q11201 340 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 SMAD4Q13485 552 aaKnown RBP22.19■■□□□ 1.14
CHD4-213ENST00000545584 C8orf76Q96K31 380 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 ZSCAN31Q96LW9 406 aaPredicted RBP22.19■■□□□ 1.14
CHD4-213ENST00000545584 CDCA3Q99618 268 aaPredicted RBP22.19■■□□□ 1.14
CHD4-213ENST00000545584 MTRQ99707 1265 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 IFT122Q9HBG6 1241 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 FAM105AQ9NUU6 356 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 SPG21Q9NZD8 308 aa22.19■■□□□ 1.14
CHD4-213ENST00000545584 ATF7P17544 494 aaPredicted RBP22.18■■□□□ 1.14
CHD4-213ENST00000545584 ERVFC1P60507 584 aa22.18■■□□□ 1.14
CHD4-213ENST00000545584 GUCY1B3Q02153 619 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms