RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CXCL10P02778 98 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 CYP3A4P08684 503 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 GNAT1P11488 350 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 ATP2A2P16615 1042 aaKnown RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 RHOQP17081 205 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 TXLNAP40222 546 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 SETQ01105 290 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 SP4Q02446 784 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 MTMR3Q13615 1198 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 EFHC2Q5JST6 749 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 TRIM46Q7Z4K8 759 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 TRIM22Q8IYM9 498 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 FAM177A1Q8N128 213 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 BICD2Q8TD16 824 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 LMBR1Q8WVP7 490 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 ATP6V0A1Q93050 837 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 WNT8BQ93098 351 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 PHKBQ93100 1093 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 IL17RAQ96F46 866 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 PGBD1Q96JS3 809 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 CDX2Q99626 313 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 SLC26A6Q9BXS9 759 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 UPF3BQ9BZI7 483 aaKnown RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 ZNF576Q9H609 170 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 TMEM260Q9NX78 707 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 SLC9A2Q9UBY0 812 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 MSRAQ9UJ68 235 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 DYRK1BQ9Y463 629 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 TELO2Q9Y4R8 837 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 PCDHA11Q9Y5I1 949 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 NRCAMQ92823 1304 aa8.73□□□□□ -1.01
SNHG1-223ENST00000545440 PRRC2BQ5JSZ5 2229 aaKnown RBP8.73□□□□□ -1.01
SNHG1-223ENST00000545440 FNDC1Q4ZHG4 1894 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 GSTTP1A0A1W2PQM5 241 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 GRXCR1A8MXD5 290 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 MEIS1O00470 390 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CPLX1O14810 134 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 NBNO60934 754 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 EFCAB14O75071 495 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 F11P03951 625 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 EPB42P16452 691 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 MPSTP25325 297 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CCT2P78371 535 aaKnown RBP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 ADAM17P78536 824 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 ZNF200P98182 395 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 GPNMBQ14956 572 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 ZNF618Q5T7W0 954 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 UTP14CQ5TAP6 766 aaKnown RBP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 TAF2Q6P1X5 1199 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CNKSR3Q6P9H4 555 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CPLX2Q6PUV4 134 aaKnown RBP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CYP2W1Q8TAV3 490 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 PHOSPHO2Q8TCD6 241 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 SEPT1Q8WYJ6 367 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CITED4Q96RK1 184 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 FTOQ9C0B1 505 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 SAP130Q9H0E3 1048 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 RNPEPQ9H4A4 650 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 SMARCAD1Q9H4L7 1026 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 AGO4Q9HCK5 861 aaKnown RBP8.72□□□□□ -1.01
SNHG1-223ENST00000545440 AAASQ9NRG9 546 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 STK36Q9NRP7 1315 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CHD7Q9P2D1 2997 aa8.72□□□□□ -1.01
SNHG1-223ENST00000545440 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.01
SNHG1-223ENST00000545440 IGLV3-22A0A075B6J6 115 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 ABHD14A-ACY1A0A1B0GW23 586 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 MBLAC1A4D2B0 266 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-223ENST00000545440 FAM86B1E9PN63 330 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 TREHO43280 583 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 CDKL5O76039 1030 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 DEXIO95424 95 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 RPLP2P05387 115 aaKnown RBP8.71□□□□□ -1.02
SNHG1-223ENST00000545440 FAM86B2P0C5J1 330 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 ARP10275 920 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 FOSL2P15408 326 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 NPR3P17342 541 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 MSX1P28360 303 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 ZNF76P36508 570 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 THPOP40225 353 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 KCNJ6P48051 423 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 ACTR2P61160 394 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 WDR5P61964 334 aaKnown RBP8.71□□□□□ -1.02
SNHG1-223ENST00000545440 PPFIA1Q13136 1202 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 ITGB3BPQ13352 177 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-223ENST00000545440 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 SH3PXD2AQ5TCZ1 1133 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 RPAINQ86UA6 219 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 MYLIPQ8WY64 445 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 GLG1Q92896 1179 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 AZI2Q9H6S1 392 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 SETD4Q9NVD3 440 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 KLK14Q9P0G3 267 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms