RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CTSHP09668 335 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 KLRC1P26715 233 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 DPYDQ12882 1025 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 GNL2Q13823 731 aaKnown RBP8.29□□□□□ -1.08
CPSF7-224ENST00000544990 GPNMBQ14956 572 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
CPSF7-224ENST00000544990 MARCH8Q5T0T0 291 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 MTHFD1LQ6UB35 978 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 Q7L0L9 218 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 TRMT1LQ7Z2T5 733 aaKnown RBP8.29□□□□□ -1.08
CPSF7-224ENST00000544990 SLFN12Q8IYM2 578 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 NME8Q8N427 588 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 DBF4BQ8NFT6 615 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 ETNPPLQ8TBG4 499 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 DNAJB3Q8WWF6 145 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 SEPT8Q92599 483 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 APBB2Q92870 758 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 PBX4Q9BYU1 374 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 UNC45AQ9H3U1 944 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 SLC28A3Q9HAS3 691 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 PLA2G2EQ9NZK7 142 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 GBF1Q92538 1859 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 MAGEB2O15479 319 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 SLC37A4O43826 429 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 ATP4AP20648 1035 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 FSHRP23945 695 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 TMOD1P28289 359 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 SEC13P55735 322 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 WDR5P61964 334 aaKnown RBP8.28□□□□□ -1.08
CPSF7-224ENST00000544990 MRPS6P82932 125 aaKnown RBP8.28□□□□□ -1.08
CPSF7-224ENST00000544990 GUCY1B3Q02153 619 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 PPP2R5CQ13362 524 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 PLEKHG4Q58EX7 1191 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 EARS2Q5JPH6 523 aaKnown RBP8.28□□□□□ -1.08
CPSF7-224ENST00000544990 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 FBXO18Q8NFZ0 1043 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 TRAPPC12Q8WVT3 735 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 GJA10Q969M2 543 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 TMX3Q96JJ7 454 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 FAM161BQ96MY7 647 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 FAM49AQ9H0Q0 323 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-224ENST00000544990 FOXP1Q9H334 677 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-224ENST00000544990 ZNF576Q9H609 170 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 KCNMB3Q9NPA1 279 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 CDY2AQ9Y6F7 541 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 SQORQ9Y6N5 450 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 LOXHD1Q8IVV2 1947 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 RANBP2P49792 3224 aaKnown RBP8.28□□□□□ -1.08
CPSF7-224ENST00000544990 IGSF9BQ9UPX0 1349 aa8.28□□□□□ -1.08
CPSF7-224ENST00000544990 MICAL3Q7RTP6 2002 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 ADH1CP00326 375 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 CHRNA1P02708 482 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 AMHP03971 560 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 P4HBP07237 508 aaKnown RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 RABGGTBP53611 331 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 PSMC5P62195 406 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 CLDN10P78369 228 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 PRKCEQ02156 737 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 MGAT3Q09327 533 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 CALCRLQ16602 461 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 XKR3Q5GH77 459 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 ODR4Q5SWX8 454 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 B3GNT9Q6UX72 402 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 FAM43BQ6ZT52 329 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 HERC6Q8IVU3 1022 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 USP38Q8NB14 1042 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 TPCN2Q8NHX9 752 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 CELF4Q9BZC1 486 aaKnown RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 TTYH1Q9H313 450 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 NOL7Q9UMY1 257 aaKnown RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 PCDHA12Q9UN75 941 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-224ENST00000544990 TRPV2Q9Y5S1 764 aa8.27□□□□□ -1.09
CPSF7-224ENST00000544990 SZT2Q5T011 3432 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 CARNS1A5YM72 827 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 ZBTB42B2RXF5 422 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 ZNF862O60290 1169 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 NEMFO60524 1076 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 C22orf31O95567 290 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 GHRP10912 638 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 ATP2B1P20020 1258 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 QARSP47897 775 aaKnown RBP8.26□□□□□ -1.09
CPSF7-224ENST00000544990 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 TMEM62Q0P6H9 643 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 ORC2Q13416 577 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-224ENST00000544990 EPHA7Q15375 998 aa8.26□□□□□ -1.09
CPSF7-224ENST00000544990 FBXO47Q5MNV8 452 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms