RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, human

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-215	ENST00000544909	C17orf75	Q9HAS0	396 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	DNAJC12	Q9UKB3	198 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	CLIC2	O15247	247 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	RAD51C	O43502	376 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	PLS3	P13797	630 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	SFN	P31947	248 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	CARS	P49589	748 aa	Known RBP	13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	KCNA1	Q09470	495 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	DNAJC21	Q5F1R6	531 aa	Known RBP	13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	KDM7A	Q6ZMT4	941 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	USP37	Q86T82	979 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	C4orf19	Q8IY42	314 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	ARFGAP2	Q8N6H7	521 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	METTL13	Q8N6R0	699 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	FAM81B	Q96LP2	452 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	FAM114A2	Q9NRY5	505 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	NFU1	Q9UMS0	254 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	NOC2L	Q9Y3T9	749 aa	Known RBP	13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	UBIAD1	Q9Y5Z9	338 aa		13.53	□□□□□ -0.24
PAAF1-215	ENST00000544909	GOLGA6L10	A0A0M3HER8	536 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	EIF3H	O15372	352 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	SART1	O43290	800 aa	Known RBP	13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	EXOC3	O60645	756 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	HIP1R	O75146	1068 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	MTA2	O94776	668 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	GZMA	P12544	262 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	QARS	P47897	775 aa	Known RBP	13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	JAK3	P52333	1124 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	GALC	P54803	685 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	GTF2B	Q00403	316 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	BIRC3	Q13489	604 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	KIAA1755	Q5JYT7	1200 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	PADI6	Q6TGC4	694 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	MIER3	Q7Z3K6	550 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	DAAM2	Q86T65	1068 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	DAW1	Q8N136	415 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	LMO3	Q8TAP4	145 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	KCNN1	Q92952	543 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	GPR88	Q9GZN0	384 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	KIAA1683	Q9H0B3	1180 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	RAB17	Q9H0T7	212 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	KCNH7	Q9NS40	1196 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	EHD2	Q9NZN4	543 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	EXOC7	Q9UPT5	735 aa		13.52	□□□□□ -0.25
PAAF1-215	ENST00000544909	SYNGAP1	Q96PV0	1343 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	MYH11	P35749	1972 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	GOLGA6L10	A6NI86	522 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	TCP10L2	B9ZVM9	353 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	MAFG	O15525	162 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	CEP104	O60308	925 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	GGPS1	O95749	300 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	RARRES1	P49788	294 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	IRAK1	P51617	712 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	DRG2	P55039	364 aa	Known RBP	13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	RUFY4	Q6ZNE9	571 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	SYCP3	Q8IZU3	236 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	TTLL6	Q8N841	843 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	TSEN2	Q8NCE0	465 aa	Known RBP	13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	C3orf20	Q8ND61	904 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	LNX1	Q8TBB1	728 aa	Predicted RBP	13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	CASKIN2	Q8WXE0	1202 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	RUNDC3B	Q96NL0	473 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	ZIM3	Q96PE6	472 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	ANKEF1	Q9NU02	776 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	PGAP2	Q9UHJ9	254 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	KCNG1	Q9UIX4	513 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	CCPG1	Q9ULG6	757 aa		13.51	□□□□□ -0.25
PAAF1-215	ENST00000544909	KRIT1	O00522	736 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	DHX15	O43143	795 aa	Known RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	CHMP2A	O43633	222 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	DKC1	O60832	514 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	AR	P10275	920 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	ITGB5	P18084	799 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	PTEN	P60484	403 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	TNFAIP1	Q13829	316 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	DHX34	Q14147	1143 aa	Known RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	CBWD6	Q4V339	395 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	CBWD3	Q5JTY5	395 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	CBWD5	Q5RIA9	395 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	CCDC174	Q6PII3	467 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	XXYLT1	Q8NBI6	393 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	U2AF1L4	Q8WU68	220 aa	Known RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	RIN2	Q8WYP3	895 aa	Predicted RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	GDAP1L1	Q96MZ0	367 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	RPS6KC1	Q96S38	1066 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	PAGR1	Q9BTK6	254 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	SMARCAL1	Q9NZC9	954 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	RRP15	Q9Y3B9	282 aa	Known RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	FAM187A	A6NFU0	413 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	TMCO5B	A8MYB1	307 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909		K7ENM7	598 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	MYO1C	O00159	1063 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	CHRNA5	P30532	468 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	GTF2H1	P32780	548 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	VAMP7	P51809	220 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	NCKAP1L	P55160	1127 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	EIF3B	P55884	814 aa	Known RBP	13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	KRT76	Q01546	638 aa		13.5	□□□□□ -0.25
PAAF1-215	ENST00000544909	EPC2	Q52LR7	807 aa		13.5	□□□□□ -0.25

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