RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 GAS2O43903 313 aaKnown RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 EYA4O95677 639 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 P4HBP07237 508 aaKnown RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 GTF2F1P35269 517 aaKnown RBP eCLIP14.7□□□□□ -0.063e-7■■■■■ 29.2
RTN3-213ENST00000543552 KRT2P35908 639 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 RFC5P40937 340 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 RAB27AP51159 221 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 POLGP54098 1239 aaPredicted RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 AK2P54819 239 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 COASYQ13057 564 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 BMS1Q14692 1282 aaKnown RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 TWF2Q6IBS0 349 aaKnown RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 KCNT2Q6UVM3 1135 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 ANO5Q75V66 913 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 ADGRD2Q7Z7M1 963 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 RBM23Q86U06 439 aaKnown RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 SMRP1Q8NCR6 262 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 MRPS27Q92552 414 aaKnown RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.067e-11■□□□□ 8.6
RTN3-213ENST00000543552 ZNF668Q96K58 619 aaPredicted RBP14.7□□□□□ -0.06
RTN3-213ENST00000543552 MSLNLQ96KJ4 702 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 CASD1Q96PB1 797 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 TRAIPQ9BWF2 469 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 CWH43Q9H720 699 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 ENTPD7Q9NQZ7 604 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 CYP26B1Q9NR63 512 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 SPG21Q9NZD8 308 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 A0A087WZ62 844 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 PRR33A8MZF0 331 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 STBD1O95210 358 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 DRP2Q13474 957 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 TRIM29Q14134 588 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 OTUD6AQ7L8S5 288 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 CATSPER4Q7RTX7 472 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 PSPC1Q8WXF1 523 aaKnown RBP14.69□□□□□ -0.06
RTN3-213ENST00000543552 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 FAM122AQ96E09 287 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 CEP170P1Q96L14 293 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 NLRP4Q96MN2 994 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 CEP89Q96ST8 783 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 TCF25Q9BQ70 676 aa14.69□□□□□ -0.06
RTN3-213ENST00000543552 FDXACB1Q9BRP7 624 aaPredicted RBP14.69□□□□□ -0.06
RTN3-213ENST00000543552 PIN4Q9Y237 131 aaKnown RBP14.69□□□□□ -0.06
RTN3-213ENST00000543552 TMEM150BA6NC51 233 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 FAM86C2PA6NEL3 165 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 EML1O00423 815 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 FSCN2O14926 492 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 FGFR4P22455 802 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 PLA2G5P39877 138 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 PHKA2P46019 1235 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 ALDH7A1P49419 539 aaKnown RBP14.68□□□□□ -0.06
RTN3-213ENST00000543552 EPHA7Q15375 998 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 DUSP6Q16828 381 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 CLLU1OSQ5K130 101 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 PLPP4Q5VZY2 271 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 GLB1LQ6UWU2 654 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 ZNF598Q86UK7 904 aaKnown RBP14.68□□□□□ -0.06
RTN3-213ENST00000543552 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 C4orf19Q8IY42 314 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 HELQQ8TDG4 1101 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 TCP11Q8WWU5 503 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 SH2D3AQ9BRG2 576 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 LXNQ9BS40 222 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 RNF19AQ9NV58 838 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 COL4A3BPQ9Y5P4 624 aa14.68□□□□□ -0.06
RTN3-213ENST00000543552 GLP2RO95838 553 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 YWHABP31946 246 aaKnown RBP14.67□□□□□ -0.06
RTN3-213ENST00000543552 ERVFC1P60507 584 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 SMC1AQ14683 1233 aaKnown RBP14.67□□□□□ -0.06
RTN3-213ENST00000543552 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 LRRC55Q6ZSA7 311 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 TMC7Q7Z402 723 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 OXER1Q8TDS5 423 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 PGBD4Q96DM1 585 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 DHX33Q9H6R0 707 aaKnown RBP14.67□□□□□ -0.06
RTN3-213ENST00000543552 C11orf16Q9NQ32 467 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 RAPGEFL1Q9UHV5 662 aa14.67□□□□□ -0.06
RTN3-213ENST00000543552 BARX2Q9UMQ3 279 aaPredicted RBP14.67□□□□□ -0.06
RTN3-213ENST00000543552 ASAP2O43150 1006 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 CSDE1O75534 798 aaKnown RBP14.66□□□□□ -0.06
RTN3-213ENST00000543552 CTDNEP1O95476 244 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 ATF7P17544 494 aaPredicted RBP14.66□□□□□ -0.06
RTN3-213ENST00000543552 SRGAP1Q7Z6B7 1085 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 SLC39A11Q8N1S5 342 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 HAS1Q92839 578 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 TMEM169Q96HH4 297 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 CCDC43Q96MW1 224 aaKnown RBP14.66□□□□□ -0.06
RTN3-213ENST00000543552 GJB4Q9NTQ9 266 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 AGPAT5Q9NUQ2 364 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 FAM105AQ9NUU6 356 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 STK39Q9UEW8 545 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 USP15Q9Y4E8 981 aaPredicted RBP14.66□□□□□ -0.06
RTN3-213ENST00000543552 PCDHGC5Q9Y5F6 944 aa14.66□□□□□ -0.06
RTN3-213ENST00000543552 PER2O15055 1255 aa14.65□□□□□ -0.06
RTN3-213ENST00000543552 NEMFO60524 1076 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms