RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PSRC1Q6PGN9 363 aaPredicted RBP6.99□□□□□ -1.29
LTBR-212ENST00000543542 CHRDL2Q6WN34 429 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 TSHZ1Q6ZSZ6 1077 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 CATSPER4Q7RTX7 472 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 RPAINQ86UA6 219 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 ZNF410Q86VK4 478 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 MYCT1Q8N699 235 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 USP38Q8NB14 1042 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 CNNM3Q8NE01 707 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 RUSC1Q9BVN2 902 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 IFIH1Q9BYX4 1025 aaKnown RBP6.99□□□□□ -1.29
LTBR-212ENST00000543542 C2orf40Q9H1Z8 148 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 XPNPEP1Q9NQW7 623 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 KCND2Q9NZV8 630 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 SERTAD1Q9UHV2 236 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 SIP14410 1827 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 DENND3A2RUS2 1198 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 NBNO60934 754 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 GPR32O75388 356 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 CSDE1O75534 798 aaKnown RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 FGFR4P22455 802 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 SFPQP23246 707 aaKnown RBP eCLIP6.98□□□□□ -1.29
LTBR-212ENST00000543542 GLRA2P23416 452 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 EIF4BP23588 611 aaKnown RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 GUCY2CP25092 1073 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 CD52P31358 61 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 ARL2P36404 184 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 NDUFA8P51970 172 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 SMTNP53814 917 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 PEX3P56589 373 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 ASIC1P78348 528 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 MKRN4PQ13434 485 aaPredicted RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 CAPSQ13938 189 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 LPIN1Q14693 890 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 C1orf186Q6ZWK4 172 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 ZNF365Q70YC5 407 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 OTOP2Q7RTS6 562 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 SRGAP1Q7Z6B7 1085 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 CCDC65Q8IXS2 484 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 LINC01465Q8N7H1 131 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 DBF4BQ8NFT6 615 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 DDX12PQ92771 950 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 APBB2Q92870 758 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 CCDC47Q96A33 483 aaKnown RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.98□□□□□ -1.29
LTBR-212ENST00000543542 REEP2Q9BRK0 252 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 TNMDQ9H2S6 317 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 MAGEF1Q9HAY2 307 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 KMT5AQ9NQR1 393 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 LARSQ9P2J5 1176 aaKnown RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 USP25Q9UHP3 1055 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 KCNG1Q9UIX4 513 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 HOOK1Q9UJC3 728 aaKnown RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 ODF2LQ9ULJ1 636 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 PADI3Q9ULW8 664 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 NOC2LQ9Y3T9 749 aaKnown RBP6.98□□□□□ -1.29
LTBR-212ENST00000543542 SQORQ9Y6N5 450 aa6.98□□□□□ -1.29
LTBR-212ENST00000543542 MYMKA6NI61 221 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 H0YCG3 227 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 K7ENM7 598 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 K7ERI5 159 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 SLC16A4O15374 487 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 KINO60870 393 aaKnown RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 EFCAB14O75071 495 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 GADD45BO75293 160 aaPredicted RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 ZNF202O95125 648 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 AMHP03971 560 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 PLS3P13797 630 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 DARSP14868 501 aaKnown RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 MATR3P43243 847 aaKnown RBP eCLIP6.97□□□□□ -1.29
LTBR-212ENST00000543542 NAMPTP43490 491 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 UBE2HP62256 183 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 FAM160A1Q05DH4 1040 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 STRN3Q13033 797 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 GIT2Q14161 759 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 MBTPS1Q14703 1052 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 LONRF3Q496Y0 759 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 NAALADL2Q58DX5 795 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 PLEKHG4Q58EX7 1191 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 ARSHQ5FYA8 562 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 HERC4Q5GLZ8 1057 aaPredicted RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 PRPF38BQ5VTL8 546 aaKnown RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 KANK3Q6NY19 840 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 TRAF7Q6Q0C0 670 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 FAM228AQ86W67 206 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 FAM178BQ8IXR5 827 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 GRAMD1CQ8IYS0 662 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 LRRC15Q8TF66 581 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 BICD1Q96G01 975 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 RNPC3Q96LT9 517 aaKnown RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 FTHL17Q9BXU8 183 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 BLZF1Q9H2G9 400 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 ADAMTS10Q9H324 1103 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 GOLPH3LQ9H4A5 285 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms