RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PXDNLA1KZ92 1463 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 USP32Q8NFA0 1604 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 TMEM191BP0C7N4 346 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 FGFR4P22455 802 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 TRIM50Q86XT4 487 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 DHX36Q9H2U1 1008 aaKnown RBP20.74■□□□□ 0.91
SUDS3-204ENST00000543473 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 LRRIQ4A6NIV6 560 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 MX2P20592 715 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PPP1R2P3Q6NXS1 205 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PAGR1Q9BTK6 254 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 MIS12Q9H081 205 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 ZNF446Q9NWS9 450 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 ANKFY1Q9P2R3 1169 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 USP15Q9Y4E8 981 aaPredicted RBP20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PPLO60437 1756 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 CD163L1Q9NR16 1453 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 TNNC2P02585 160 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 DYNC1I2Q13409 638 aaKnown RBP20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PDIA6Q15084 440 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 KIAA1755Q5JYT7 1200 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 TRPM8Q7Z2W7 1104 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 TRIM59Q8IWR1 403 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 SRBD1Q8N5C6 995 aaKnown RBP20.73■□□□□ 0.91
SUDS3-204ENST00000543473 SH3RF3Q8TEJ3 882 aaPredicted RBP20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PI4KBQ9UBF8 816 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 TMPRSS15P98073 1019 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PLCB4Q15147 1175 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 SENP2Q9HC62 589 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 CCT8L1PA6NM43 557 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 CCDC125Q86Z20 511 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
SUDS3-204ENST00000543473 MYCBPAPQ8TBZ2 947 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 ARL8AQ96BM9 186 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 TRIM51Q9BSJ1 452 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 CALN1Q9BXU9 219 aa20.73■□□□□ 0.91
SUDS3-204ENST00000543473 DCP1AQ9NPI6 582 aaPredicted RBP20.73■□□□□ 0.91
SUDS3-204ENST00000543473 FTLP02792 175 aaPredicted RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 ORC2Q13416 577 aaPredicted RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 CTTNQ14247 550 aaKnown RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 CYB5D1Q6P9G0 228 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 KDM7AQ6ZMT4 941 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 LRGUKQ96M69 825 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 NAALADL2Q58DX5 795 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 KRT80Q6KB66 452 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 DDX42Q86XP3 938 aaKnown RBP eCLIP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 POTEB3A0JP26 581 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 POTECB2RU33 542 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 NCF2P19878 526 aaPredicted RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 CACNB3P54284 484 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 POTEBQ6S5H4 581 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 CRLF3Q8IUI8 442 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 ZNF34Q8IZ26 560 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 NME8Q8N427 588 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 TRAIPQ9BWF2 469 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 PDS5AQ29RF7 1337 aaKnown RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 GIMAP8Q8ND71 665 aaPredicted RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 CALR3Q96L12 384 aaKnown RBP20.72■□□□□ 0.91
SUDS3-204ENST00000543473 PLA2G12BQ9BX93 195 aa20.72■□□□□ 0.91
SUDS3-204ENST00000543473 CAMTA2O94983 1202 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 YARSP54577 528 aaKnown RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 ARHGEF16Q5VV41 709 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 KMT5AQ9NQR1 393 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 DALRD3Q5D0E6 543 aaKnown RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 DARS2Q6PI48 645 aaKnown RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 PIGOQ8TEQ8 1089 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 DCPSQ96C86 337 aaKnown RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 TTC25Q96NG3 672 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 TMEM260Q9NX78 707 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 RAB21Q9UL25 225 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 GOLGA8IPA6NC78 632 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 GOLGA8JA6NMD2 632 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 KLK7P49862 253 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 C1orf146Q5VVC0 180 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 FAM84BQ96KN1 310 aaPredicted RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 ISCUQ9H1K1 167 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 EHD2Q9NZN4 543 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 KRT37O76014 449 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 CCND1P24385 295 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 ARFIP2P53365 341 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 ST3GAL1Q11201 340 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 GRM4Q14833 912 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 ZNF746Q6NUN9 644 aaPredicted RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 ZNF564Q8TBZ8 553 aaPredicted RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 TTC1Q99614 292 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 SUDS3Q9H7L9 328 aaPredicted RBP20.71■□□□□ 0.91
SUDS3-204ENST00000543473 SEPT10Q9P0V9 454 aa20.71■□□□□ 0.91
SUDS3-204ENST00000543473 CFAP69A5D8W1 941 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 COPEO14579 308 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 ITPK1Q13572 414 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 WDR75Q8IWA0 830 aaKnown RBP20.7■□□□□ 0.9
SUDS3-204ENST00000543473 FGD4Q96M96 766 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 CCPG1Q9ULG6 757 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 TTC7AQ9ULT0 858 aaPredicted RBP20.7■□□□□ 0.9
SUDS3-204ENST00000543473 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 A0A1W2PQJ5 194 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 TJP3O95049 919 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 ZWINTO95229 277 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms