RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 SPO11Q9Y5K1 396 aa4.78□□□□□ -1.64
GTF2H3-213ENST00000543415 ATP23Q9Y6H3 246 aa4.78□□□□□ -1.64
GTF2H3-213ENST00000543415 TNKSO95271 1327 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 A0A1B0GTL3 188 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 TCRBV5S4A2TA0A5A2 114 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 MAN2B1O00754 1011 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 SLC27A2O14975 620 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 TGM5O43548 720 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 MAFKO60675 156 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 C8BP07358 591 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 COL6A1P12109 1028 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 BDNFP23560 247 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 AK2P54819 239 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 SCAND1P57086 179 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 GJA9P57773 515 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 BTKQ06187 659 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 KLF1Q13351 362 aaPredicted RBP4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 PDE1CQ14123 709 aaPredicted RBP4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 GBX1Q14549 363 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 CHRNA2Q15822 529 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 CLUL1Q15846 466 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 ZNF827Q17R98 1081 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 FIGNQ5HY92 759 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 TMEM240Q5SV17 173 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 GPR158Q5T848 1215 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 CREB3L3Q68CJ9 461 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 FSTL4Q6MZW2 842 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 PGM2L1Q6PCE3 622 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 DCP2Q8IU60 420 aaKnown RBP4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 RIOX2Q8IUF8 465 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 ADGRG2Q8IZP9 1017 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 NLGN4XQ8N0W4 816 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 CARFQ8N187 725 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 HSPBAP1Q96EW2 488 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 NOX5Q96PH1 765 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 STRBPQ96SI9 672 aaKnown RBP4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 ELF4Q99607 663 aaPredicted RBP4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 MYD88Q99836 296 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 TCF7L1Q9HCS4 588 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 NTMQ9P121 344 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 SRPK3Q9UPE1 567 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 FAM50BQ9Y247 325 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 MYRFQ9Y2G1 1151 aa4.77□□□□□ -1.65
GTF2H3-213ENST00000543415 hCG_1642624A0A1W2PR95 340 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 GOLGA8AA7E2F4 631 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 GOLGA8BA8MQT2 603 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 ANP32CO43423 234 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 SLC26A4O43511 780 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 XPOTO43592 962 aaKnown RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 ZBTB48P10074 688 aaPredicted RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 SLC6A11P48066 632 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 TERF2Q15554 542 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 HABP4Q5JVS0 413 aaKnown RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 EFCAB2Q5VUJ9 269 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 TTLL7Q6ZT98 887 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 NOSTRINQ8IVI9 506 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 RBM12BQ8IXT5 1001 aaKnown RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 FAM26EQ8N5C1 309 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 SMARCC2Q8TAQ2 1214 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 UHMK1Q8TAS1 419 aaKnown RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 SH3RF2Q8TEC5 729 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 CCT6BQ92526 530 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 GJA10Q969M2 543 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 LTV1Q96GA3 475 aaPredicted RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 FUBP3Q96I24 572 aaKnown RBP eCLIP4.76□□□□□ -1.651e-8■■■■■ 27.5
GTF2H3-213ENST00000543415 LRGUKQ96M69 825 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 GPR20Q99678 358 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 AP5M1Q9H0R1 490 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 CSRNP2Q9H175 543 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 PCDH18Q9HCL0 1135 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 ACSS2Q9NR19 701 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 CHST12Q9NRB3 414 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 RIC8BQ9NVN3 520 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 MAP3K20Q9NYL2 800 aaKnown RBP4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 INVSQ9Y283 1065 aa4.76□□□□□ -1.65
GTF2H3-213ENST00000543415 PRAMEF25A6NGN4 478 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 F5H423 210 aaPredicted RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 EXOC5O00471 708 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 DVL2O14641 736 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 HGSO14964 777 aaPredicted RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 KDM1AO60341 852 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 NOBOXO60393 691 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 CLASP2O75122 1294 aaKnown RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 OFD1O75665 1012 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 LTFP02788 710 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 SETSIPP0DME0 302 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 CD40P25942 277 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 PTX3P26022 381 aaPredicted RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 SARSP49591 514 aaKnown RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 ERVK-21P61565 698 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 CACNB2Q08289 660 aaPredicted RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 KRT72Q14CN4 511 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 PUM3Q15397 648 aaKnown RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 SLC4A8Q2Y0W8 1093 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 PRR16Q569H4 304 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 IFIT1BQ5T764 474 aaKnown RBP4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 BTBD8Q5XKL5 378 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 MMS22LQ6ZRQ5 1243 aa4.75□□□□□ -1.65
GTF2H3-213ENST00000543415 KCTD1Q719H9 257 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms